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13-3828-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30223385 [Map]; Strand: w
      • AT1G80390.1 - [+] show detail - indole-3-acetic acid inducible 15
        Distance: -683; Region: promoter
    Flanking Genome Sequence: 13-3828-1 - 5-prime edge 
    CTTATAATCG TTGGAAAATA TAATAAACTT TATTCCCATA TATATTTGTT 
    TGTGTTTGTC AACTTCAGTC CAATAATTTA ACATTAGACC AAAAAAAAAA 
    ANCTNNNGCC CAANNNNTNN TTGGGGNGNN ANCTTAAANN GGGNCCCTTT 
    GGNNNNCNCT TGGNGGNCGT TTANCNCCTT NAAATNNTNN TCCNANCNAN 
    CTTTTTNTGG GNAAAAANGT TNCCCCNTTN TNTTNGTCCN TNANCTTNNN 
    NNGNNGCGGG CNAAAANNAA NNNNGGGNNA ANNAANNTNT CCCNAATTNT 
    TTNTNNTGGN NCCCTNCNCN CTANTNGGGN CCAANCCCNN TCNNTNGGTT 
    AAANNTTNCC CCGANTTTNA AAAAAANNCC CANCNATTTG NCGGGGGGNN 
    TTGGNAANNA AGNAAAAGAN NGTNCCCCCC AAAAAACNAA GGGGACCGGA 
    NNTNANGNGG TGGGANNTTT NNCNTTCAAA NNGGNAAAAA ANTNNAAGAA 
    AAAANTTTTN NNGNCCNNCN NTCTTNGGGA NAAAGNNGNC TAAAANNTTN 
    NTGGTTNGGG GNNAAAAAAA AGGNGGNGGG NNGGNNACNT CCCCNTTTTT 
    NNGGGGANAA AGGNANAAAN GTTTTTTNCN NNANAGNTNT TTTCNNNGGN 
    CCNNGGTNTT ANTNNNNTNA TGGCNNCTTT NATNNNNNCC CCATNNANAA 
    AAGGGAAGNT

AT1G80390.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 15
Curator Summary
Member of a multigene family of Auxin responsive genes.
Computational Description
indole-3-acetic acid inducible 15 (IAA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1649 Blast hits to 1649 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1649; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR