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13-3916-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3810417 [Map]; Strand: c
      • AT1G11330.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G11330.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3916-1 - 5-prime edge
    GATAGGAGTT GAGAAAGTGA TTCTGTCCTC ACCAAAACAG AGTCTCAGAG 
    ACAACAAGCA AGTGCATGCA AGTAGAAGAA GACCAAAACG ACGACGTATG
    TTCACTGAAA CCACCATAAC TCTTTGAAAC AGAGAATGAC TCCAGTTTTG
    CTTTGTTTTC CTACACGAGA GGTAAATTAG TAGTCTTTTT CTGTCTCTAT
    GAGAAGACTT GACTTAGAAA ATGATGTAAA AGTTTTATGT TTCAACGAAG
    ATTTGTTTTT GGTGTGAGTA ATAATGTTAT TAGGTGGATT CATTGAATAG
    CCCACCAATT AGCAGTGAGA GTGGAACAAA CCACCAATCT TGACTTTTCT
    TTAAATGCAG AAGAAACGAT TGAAAGTGAG AGGACTACTT GCCTTAGTGC
    GATTTCAATG GGGTCATTGT TTATAAATTT CGAGTACACT TGTTTTATTT
    GCAGATTATA GCATTTGAAT ACAAATATTA CTTTTTTCTG TTCTCATTCT
    TGGTGATACA AACGAACGCG TGTTTCACAG CCCACTTGGT GTTTTGCCGT
    CGTTAAAGTT TGAGGAATTT GAGTTGAATT TGTTTATGTC ATCCCGTTCT
    AGATTGGATT AGGTCGCAAA TCTTTTTGTG GGTAGCTAAT TTGGAATTTG
    TTGAGGCAAG CACACAATGT ATCACATGAA ATGCCTAAAC GA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3810533 [Map]; Strand: c
      • AT1G11330.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G11330.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-3916-1 - 3-prime edge
    CTCCTATCAA AGACTCAGAG TCAGAGACCC TTCTCTGCAA AAGTGGTATT 
    TTCAGGTTTG GTTTCTTCAC TCCTGTTAAT TCCACTACTC GGTTACGTTA
    TGTTGGGATT TGGTACGAAA AGATTCCAAT CCAAACTGTG GTTTGGGTTG
    CTAACAAAGA CTCTCCCATC AACGACACTT CCGGTGTTAT CTCGATCTAT
    CAAGATGGAA ATCTCGCGGT TACCGATGGT CGAAATCGCC TTGTATGGTC
    GACGAATGTC TCAGTACCAG TAGCTCCAAA TGCTACTTGG GTTCAGCTTA
    TGGATTCTGG GAATCTTATG TTACAAGACA ACAGAAACAA TGGTGAGATT
    CTTTGGGAGA GTTTCAAGCA TCCTTATGAT TCTTTCATGC CAAGAATGAC
    TCTTGGCACC GACGGTAGAA CTGGAGGTAA CCTAAAGCT

AT1G11330.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1); Has 124566 Blast hits to 122714 proteins in 4439 species: Archae - 108; Bacteria - 13570; Metazoa - 45533; Fungi - 10903; Plants - 35507; Viruses - 467; Other Eukaryotes - 18478 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11330.2

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1).
Link
InterPro Scan - TAIR