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13-3974-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7000095 [Map]; Strand: w
      • AT1G20190.1 - [+] show detail - expansin 11
        Distance: -278; Region: promoter
    Flanking Genome Sequence: 13-3974-1 - 5-prime edge 
    GTTACAGTAA TATTGCTTTG AACTATATAT AAACATTTTC CTCTGAAATT 
    ATATAAGAAA AAGAGACTTG AAGCAGATAA TATCTTGATT TACTCATAGC 
    CAAACATTTG TAATCCTAAA GTTTTGTTTT ATTGGTTGAT GCAGCATTTT 
    TTTTATACAT AAGTTAAAGT TATTGTAAGA TTGCAAATTT TAAATCAGCA 
    TGGTCATCAA AAATTCAAAA CTAAGAGAAT AATCATATGG GTAAATGATT 
    TGTTGTGCAA CGCGGNGGAT ATTTAATTTT TGCTTAAAAT GAATAAAGTA 
    AGACGAAAGA AAGACAAATG AGAGTTTTTT GTTTGTGATA CAATCATGTG 
    CAGGTTGGTC TGAGCAGGTT CATCGGTCAC AGACTCTCAC ATGCTCACTT 
    GTCCTACATT ATTAGCAACA CGCCAAATCT CTTTCTTATC ATTATGATTA 
    TGATTATTAA TNGTCCCTCA AAACTTGATT TCCAATCAAA GTTGATGAAG 
    ATCACCGTCA CGACGTCGTT TGTTACNAAC ACTTCCGTCA ACTTAACACT 
    TGTTCGTTGT CACCAACATA TGAAAAATCG TGGACTGCAA AGTCTGCAAT 
    CCGAAATCCA GACTACACTA CCANGTAACT TCCGCAGTAA GAAAACAAAA 
    TATGGATACT GGATACAACA AGATTAAGGG AATTGAGGAG CTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6999979 [Map]; Strand: w
      • AT1G20190.1 - [+] show detail - expansin 11
        Distance: -162; Region: promoter
    Flanking Genome Sequence: 13-3974-1 - 3-prime edge 
    ACTGTAACCA AAGGTAAATT TTGTATGAAC TTTTTGGAGG AATAGAAATC 
    CATCTGCAGC ATTATTACAA ACAGAGTTTG CAGATC

AT1G20190.1

Model type
Protein coding
Short Description
expansin 11
Curator Summary
member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Computational Description
expansin 11 (EXPA11); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.4); Has 2193 Blast hits to 2189 proteins in 161 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 64; Plants - 2080; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR