1. Home
  2. Mutant Lines
  3. 13-4026-1

13-4026-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18769592 [Map]; Strand: w
      • AT5G46270.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -502; Region: promoter
    Flanking Genome Sequence: 13-4026-1 - 5-prime edge 
    ATTATTAGGG TTTTGAAGTT GGCTTATATA TGGCACAACT CTATTCTTAC 
    CATTGGGTTA AAACAACATA TACACTATAA TCTTGATGTC GATTACATAT 
    GTATAAAATT TGGCATAAAC AGCTCAAGAA ATTATAGGAT AAATATGAAA 
    GTATTTTATT CTCGGATTGT GCTTTTCGTT ATAAATTCCA AATTTTATAA 
    TCAGATGCGT TTTTTTAAGC ATTTTATCAT CAGTTTTACT TCACTAGTAA 
    ATGCAAAAAA CATAACGTAT GAATAAAGAT TTTACAAAAT GATATTTTGG 
    TTTCCAAGAG TTTACTACTA CACTATTTTT GAGTTCTAAT ATGATGATGA 
    TGATGCAATC AATATTGATT TCTTCATATG ATCAAATGAT ATGAACTTTG 
    CCATCGCTGA TCATCACTTT GTTATCATCT TGCAGTTTCT GCATAAAATC 
    CACAATAGAG TAAAGTTATG AAGATATTGT ATAAAAAGTT AAAGAATGAG 
    AAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18769476 [Map]; Strand: w
      • AT5G46270.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -386; Region: promoter
    Flanking Genome Sequence: 13-4026-1 - 3-prime edge 
    CTAATAATCA CTACCTTGGA ACTCTCTCGT CTAAAAGATC CATGTTTTTC 
    CATTTGGTCT CTATTACTTT TTTTTTTTTT CCAAAAAANN NNNGGTTNGG 
    CCNNNNNGGG ANNNCNNCCC GGGNCGGGNA CCCCCCGGGC CCNNAAAAAA 
    AAANNGGGGN NNNCNGGGNN NNNAANNNAA GGGGGNNAAN NNGGGNNNNN 
    NAA

AT5G46270.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46260.1); Has 19108 Blast hits to 13517 proteins in 561 species: Archae - 10; Bacteria - 780; Metazoa - 1004; Fungi - 46; Plants - 16614; Viruses - 15; Other Eukaryotes - 639 (source: NCBI BLink).
Link
InterPro Scan - TAIR