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13-4031-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26299184 [Map]; Strand: w
      • AT1G69850.1 - [+] show detail - nitrate transporter 1:2
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 13-4031-1 - 5-prime edge
    TTTGTAACAT TAAGTGGCAG AGTCACGAGG GTACGAGTGG CAGATGTTAT 
    ATAAGTGGAC ATTATAGTTT CATACCCTAT CATACGTAAA GACAAGGATA
    ACAAAAATAA ATAAAAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26299068 [Map]; Strand: w
      • AT1G69850.1 - [+] show detail - nitrate transporter 1:2
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 13-4031-1 - 3-prime edge
    GTTACAAAAG ACAAAACAAA CTTGTAGTTC TAAAGTACCG TTGAGGCTCT 
    TAATATTTTG TGGGTAGCGT TTGGCCGGAC GCAAACGCAA ACGCTCACTC
    TTCTACTTCC CATTATGGAT AGAGATATTG ATGGTTCATG TATACCTATA
    CACTATTATA ACTTCATTAG AAAACTTTAA CAGATTACAA GAAAATATAT
    ATAGCTGACT TAACTTATAA TTTTCCTTGT CACTTTTTGT ATAGATTTGA
    GTCATTTACT TGTATGATAT GAAGTATTTA TATTCCATAC ATTTATCTAG
    AATCAACATA TATCAATATA TTATTGGATA ATATATACTA GAGTCCAAAA
    CTTTTAAAAC CCTGGTGTTA CGTCAGTGTA ACCGAAGTTA TTTCTTCAAG
    AAAAGGCAGT GGCCAATGAG GCGACCACAC GAAAATTAGG TTTTGTCCAT
    AACTCATTTA ANAACGATCG ACGTTTCATC GTTCATAACG GTTTCAATTA
    TTTGTATCAC GTCGCTGATC TGACTCTCAC GAACCACAAG GGTTAAACTC
    TCTCACGTGC CCCTGGTCCC ATTCCCATAC TATTCTTTGC TAATCCCAAA
    AAAATAACCG TCTCTAATTA ATGATTTTAA CAAATCAATA TGATTAAAAA
    TTTNTTTGGG ATGCAGGGAT TGATCATACT CACAATTCAA GCTCGGACAC
    CATNCCTTAA TGCCTCCATC GNGCGAAAG

AT1G69850.1

Model type
Protein coding
Short Description
nitrate transporter 1:2
Curator Summary
Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.
Computational Description
nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink).
Link
InterPro Scan - TAIR