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Mutant Lines
13-4049-1

13-4049-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 90844 [Map]; Strand: c
- AT1G01220.1 - [+] show detail - L-fucokinase/GDP-L-fucose pyrophosphorylase
  Distance: -532; Region: promoter

ATAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
ATCCTACTTT CATCCTCAAT AATAATGTAT ACTCAAAGTC AATAATAATG 
TATCATTAGG ATTTTAAAAC AACTTGTTAT AAATTTGCTC TATGAAACAG 
TCGAGAAAAA GATATAGGCT TGAACCAGGA TAAAATTTAA TAGATCAGTC 
TCAGCCGCAA AATGTTGTTG AAGCTCTCCA AACTCCATCA AGTCTCCATT 
AATGCAAGTT TAAGATCACA AGTTCAAGGC CAATTGTAGT AGACTGTATA 
AAGTAATTCA CTCAGGCCGA TGGAAATAGG ATTATGATTC TTAATTAGTT 
TTACAAAACT TTCCTTAGTA CTTAAACAGC TAATTAACTA GATCACAAGG 
TAACAAGACT TTTCTTAGTA CTTAAACAGC TAATTAAGGC CAATGGAAAC 
AGGACTATGA TTCTAAGATG CAATCAATCC GGAAAAAATA GTGAAAGTAT 
CATCAGTTCA TGGGTGGACG GTGTGAGCTG CAATGCTCTG TTTTCTCTAA 
TGCTATCAAC CTTCTTTCAT GGGTTTTGCC GTTTTATGCT CACAACACAA 
GGCAATGCTC ATGGGTTTTG CCGTTTTATG CTCACAACAC AAGGCAATGC 
TCCAAGTATC TGGAACTGAT TGGACCATAT GGTCCTTAGT GTGGACTTAG 
TTTTGATCTC TGGAGAATCA ATCAGGTGCT GCGTCNAAAT TCCCTATCTC 
CTACCTGAAA CAAAAANAAT AA

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23095398 [Map]; Strand: w
  - AT3G62430.1 - [+] show detail - Protein with RNI-like/FBD-like domains
    Distance: -94; Region: promoter
Flanking Genome Sequence: 13-4049-1 - 3-prime edge
```
CATGTGAAGT AACATCGTCT TATGCTTTGA AATTGATCTA GTTTGTGAAT 
TTGTGGTTGA TGTTGGAGTC AAGTCGCTGA AGGTAGTGAA AGAGGGTTTG 
AGAAAAGAAT GGATAGAATC AGTAATTT
```

AT1G01220.1

Model type: Protein coding
Short Description: L-fucokinase/GDP-L-fucose pyrophosphorylase
Curator Summary: Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.
Computational Description: L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP); FUNCTIONS IN: fucose-1-phosphate guanylyltransferase activity, fucokinase activity, ATP binding, galactokinase activity; INVOLVED IN: GDP-L-fucose salvage; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), L-fucokinase (InterPro:IPR012887), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 1878 Blast hits to 1819 proteins in 539 species: Archae - 59; Bacteria - 918; Metazoa - 155; Fungi - 3; Plants - 87; Viruses - 3; Other Eukaryotes - 653 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G62430.1

Model type: Protein coding
Short Description: Protein with RNI-like/FBD-like domains
Computational Description: Protein with RNI-like/FBD-like domains; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT3G54160.1); Has 1224 Blast hits to 1202 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1224; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR