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13-4136-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5901742 [Map]; Strand: w
      • AT1G17255.1 - [+] show detail - other RNA
        Distance: 0; Region: exon5 (NonCoding)
      • AT1G17250.1 - [+] show detail - receptor like protein 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4136-1 - 5-prime edge 
    ATCCCAGGTG GGAGGCTAAA CAGCTGATTG TATTGCTGAT GAGTTGTAAC 
    ATTATTGGGA CTGACAAAAA CTGGCAGCTT TAGATAGTTC CTTTCTGTTG 
    CGTCGTAGGC CTTTTGGGAC ATCAGAGCCT TTAGTTGGAA TAAATCCTTC 
    GGCAGCTCTC CTGAAAGAAG ATTTTCTGAG AGATCAATAT AGAAAAGGTG 
    GGGAAAAGTT CCCAACCAAC CAGGAATTGA CCCTACAAGC TGGTTGTGGG 
    ACAAATCTAT GACTGCTAAG CTCTTCAATT TGATTAGCCA AGCTGGTATT 
    TCACCTCTCA GTCCAGATCC ACCGCTAGCA AATATTTGGA GATTAGGGAA 
    TCCATCTGAG GAAATCAAGT CTTTGTCGCT TGGAAATGTT TCGTTGTAAA 
    AATTCTTTCC TATGAGGAGA GTGGACAGAT TCCTGCAGCC CTGCAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5901657 [Map]; Strand: w
      • AT1G17255.1 - [+] show detail - other RNA
        Distance: 0; Region: exon5 (NonCoding)
      • AT1G17250.1 - [+] show detail - receptor like protein 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4136-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    GGAATAACCT GAAAGGAAGT ATACCGATCG AAGTTGGCCA GTTAAAGGTT 
    CTTCATGTCC TCGAGCTTTC TCATAACTAT TTGTCTGGCA TCATCCCACA 
    TGAGTTGTCG AAACTCACCA GCTTAGAGAG GCTTGACCTG TCCAACAATC 
    ACTTATCTGG TAGAATT

AT1G17250.1

Model type
Protein coding
Short Description
receptor like protein 3
Computational Description
receptor like protein 3 (RLP3); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 2 (TAIR:AT1G17240.1); Has 81484 Blast hits to 24794 proteins in 958 species: Archae - 37; Bacteria - 4331; Metazoa - 15807; Fungi - 760; Plants - 53957; Viruses - 2; Other Eukaryotes - 6590 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G17255.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G17250
Link
InterPro Scan - TAIR