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13-4152-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17064187 [Map]; Strand: w
      • AT2G40900.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 13-4152-1 - 5-prime edge 
    GTTCCCATGA AACACACCAT TGTTGACATT GAGAGATGGG CTGAGTATTT 
    CTTCAAAGTC GCAGCCTATT TAACAAAATA TAAAAGCCTA ATTCGTTAAA 
    TCTATATTTT TATATATTAC GAAAACAGTG AAAAAAAATT CCAATCATAT 
    TATTATTTTA GATATAGTTA ACCCAATTAT TTTTTTAAAA ATTATATAAC 
    ATGAAAAATT AGAAACAACA TCCCAGTAAC ATTATTAATA CTATATCTAA 
    AATTTCAAAT TTTTTATATT ACTTTTACGT ATCCCCTACA TGGTTTGGTG 
    CATAAACTAT ATTTTCCTAT GTTGATGGAA ATTTAAAACT AATCCTAAAA 
    ACTATATTAT ACGTTTTTTA GTGATGTAAG AAGTGAGTTA TATTATACAC 
    AGGATCAATA TATAATTGAT ACATACCTGA AGAACAAAGA ACGACNCCCA 
    TGANAGGGAA GCGAGGAGTA GGAANACGGC AGCCTTAANA TAGTCAGCCG 
    TCGGCGGCGA AAAGGCGGCC GTGAGGTGAG ACCGGAAGAA ATTAATGAAA 
    GGACCTTTGT AGAATATCAT CAATATGGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17064071 [Map]; Strand: w
      • AT2G40900.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-4152-1 - 3-prime edge 
    ATGGGAACGT TACAGTCTTT AGCCCTAGCC TTCGTAATGG AACACAATCC 
    TTCTGCTTTG AACATCGGTT TTGACATGAA CCTTCTCGCT TCTGCCTACG 
    CGGTTCGTCC TTTATTTCAT CATGCCACTT TCACAAATAA CAAAAAGATC 
    AGTTTACAAA AATATTGATA CTAACATTGT GATTGGTAAC GGTTACAGGG 
    AGTAATGTCG TCGAGCATAG CTTACTACGT TCAAGGACTT ATGATGCAGC 
    GAAAAGGACC GGTCTTTGTC ACTGCTTTTA ACCCTCTTAT CGTTGTCATT 
    GTCTCCATCA TGAGCTTCTT CGTTCTCGGT CAAGGAATCT ACCTTGGAGG 
    GTACGTTAAC AACAACCGGT TAATTATGAT ATATTCCCGG TTTAGTCTTG 
    GCTCTGTCTT GTTAATTAAT CAAACCGAAA TTTGTTTTCT TTTTTCAGGG 
    TTATTGGAGT GGTTGTTTTG ATGGTGGGAG TCTACGCCGT GTTATGGGGC 
    AAACATGTAG ATGATGACGG CGAAGAAACA CGCCATGAAG ATAACGTTGT 
    AGCCGTTAAG TGTTGTAGTG GCAATAATGG TCTAACGATA ATGCCGAAAA 
    TCGACGAANC TGATGAGGAG GATGTTGAAA CCGGAAAGGC TACNTCGGAN 
    AAGGAGTCGT CAGTTCCGGA AGTGGTGGNG GTAGTTTTTT GTANNGAAAA 
    TGTGCNTANC GTTTNACNAC C

AT2G40900.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G56620.1); Has 4454 Blast hits to 4441 proteins in 784 species: Archae - 39; Bacteria - 2478; Metazoa - 2; Fungi - 0; Plants - 1222; Viruses - 0; Other Eukaryotes - 713 (source: NCBI BLink).
Link
InterPro Scan - TAIR