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13-4295-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3111348 [Map]; Strand: w
      • AT1G09610.1 - [+] show detail - Protein of unknown function (DUF579)
        Distance: -346; Region: promoter
    Flanking Genome Sequence: 13-4295-1 - 3-prime edge 
    ATTGCAAAAC CGCAACACTT TCTTTCTCTT TTTGTCTGAT ATCCCAAAAG 
    TTTCTTCCTT TCTTATCCTT TCCTGATATA TCTCACCTGC CATTTGCAGC 
    AAGAAACGCT TGAGTCTGTC TGTTATCGCC TCTATTCGTC TTCTTATCCA 
    CCCGAGCTTT GCGAACCGCT AACTGAATCT GCCTTTCATG TTCTTTCAAC 
    ATTTCATCTA AGTTTCCTCC TGCAGAAACC AAAGGCCCTG AGCAGTGCAT 
    TCTCTCTTTC TTTTCACCGT TAACCTAAAG ATAACCATAC AAATTGTGAT 
    TAGCCCACAA AGAATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3111464 [Map]; Strand: w
      • AT1G09610.1 - [+] show detail - Protein of unknown function (DUF579)
        Distance: -230; Region: promoter
    Flanking Genome Sequence: 13-4295-1 - 5-prime edge 
    TTTGCAATGT AGAGTCGACT GATCTCTGGT GGGGTCTTGT ATGATATTTG 
    TGTATTTTGT TTATTCTTCA TTCTTGTATG ATATTAAGAT TTATTAGTCC 
    TAGTAGAATC AATCATTATT GTTATTTTGG TATTTCAATT GCACTAAACG 
    GTCTAACAGA GACAAATATC GATCCAACTA CCAAGAAACT TAAATAGAAG 
    GCTTCACTCT CTTGCTTCTT TTTGCAGAAC CTGAAATTAG CTGCAATGTC 
    TTCTTCAAGT ACCCTTATAG CTTCTTTTGC TTCATGTCTA CGCATAAACC 
    CAACTTCCTC TCTTATCTCA GCATTTCTTT ATATAGTTAT TTAGGAACAA 
    GTCGTAACTT CTGTAGAATT

AT1G09610.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF579)
Computational Description
Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR