1. Home
  2. Mutant Lines
  3. 13-4304-1

13-4304-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2327083 [Map]; Strand: w
      • AT1G07550.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -522; Region: promoter
      • AT1G07560.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -237; Region: promoter
    Flanking Genome Sequence: 13-4304-1 - 5-prime edge 
    CATGACACAC ACTTGTCAGA TTTTATAATT CCACTTGAGA AAAGTCTTAC 
    CATAATCAAA TCCTATATAT TAGACAAATT ATTTCGAATT TGGTTAGAAG 
    ATCGGTCCAA CTCAATAGGT GGCNTTATTG TTATTGGTAT GTGAACGTTG 
    ACATATTTCC CGTTATGATC CGCCCCAAGC AGAAATATAA GTTAATAAAT 
    AATTATTTAA CAATTCATCC GTTTTTTATA TCCAAAGGTT TGATTTGGCA 
    TGTTTTATAT TGCAAGTACA TTGGCAATTC GTAATCCTTT TTTTTTTTGG 
    NNNANNGGGG GNAAAANAAA AANCCCCNGG GGNNTTTNNT GGNCCTNCCN 
    ANTTTGGNTT TNNGGNTTTN CCANTTTTTT TNNACCCNAA AANNANNAGG 
    GNNNANNTTT TTTNNTTCAN GGNTTTTTTT TTTAANNTTN NNNAAAANNN 
    NTTCCNTNNN NNANTTAAGC NTTNANTNCN NTTCCNAANN TTNTTTTTTN 
    NCNAAANNNT TNCTNGGNTT TTTTTTTTNG NCNTTTANAN GNATNNAAAA 
    TTTGGNNTGG GGGGNGNNAN CCCAAAAATN NTCTTTTTCC CNACCCTTTA 
    NAAAGGNNAN NTTTCCNTTN NAACCCNGNT TTTTTAAAAG GGGGAAAANG 
    GGNNAAAATC AAAAAGGNNC GGGGGGGGGG GTTTTAAAGN CCCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2326967 [Map]; Strand: w
      • AT1G07550.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -406; Region: promoter
      • AT1G07560.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -353; Region: promoter
    Flanking Genome Sequence: 13-4304-1 - 3-prime edge 
    GTGTCATGTT TAAATTTTAT AAAAAAGGTT TGCAAGTGGA AATTAGTAGA 
    ACTGATTGAT TCTAATTGGT TATCATCAAG CACACCTATA GTAGATTAAC 
    CTGAGAAAAT GAGTTATTAC CAGTGTGTGT GAAGGGATGT CATATTCATA 
    TATGGCAAAG TCACCGATCG TGTCAGAATC AAACCACGAA TATAAGCAAA 
    AGTGAACAAA TGAATCGAGA TTTTTAAAAT ATAGAGAGTA TATAACCTGG 
    TTGCATATTT TTCATTTCAA AAATTTTATA ATCAACCACT AACGTCTTGA 
    TTTATTTTAT ATGGATATTA TACCANTGGT TAGCTGTTAT TATTCGTTAG 
    ATAAAACCAT GGCAAAAGTT TAAGTTTTTA AAACAAAATT TATACNGTAN 
    ACGTCACCAT GATTAATTCC ATTTGCAGCT TATAACACTA AAAATTTGTC 
    CATTTCAAAA CTTTGGTAGT AGTAAGTTTT GTTAGTTGTG AACGAAGAAA 
    TCATCAAAAN TGGACACTNG CACCAGGCTT CTGTTTGCTG CGTGTGCCAC 
    TTTATCCATC TTACATCTTG NTCAATCTNA NAATCAACAA GGTCTTTTTA 
    TTCATCTGTT TGTCTTTTTT TACANNANTT TTGCGGAAAN ANNCCNTTCT 
    ANNTCNTNTT TTNNAGATNA AAACTTCTNT TTNAGAAAAN NCNNTTNTGA 
    NCCTTTNCNN TTNTCCGGAN CTAACCAAGG AN

AT1G07550.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G14510.1); Has 160053 Blast hits to 116886 proteins in 4275 species: Archae - 103; Bacteria - 12717; Metazoa - 42496; Fungi - 9017; Plants - 77350; Viruses - 370; Other Eukaryotes - 18000 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07560.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 156630 Blast hits to 118524 proteins in 4343 species: Archae - 91; Bacteria - 13045; Metazoa - 42701; Fungi - 9322; Plants - 73192; Viruses - 348; Other Eukaryotes - 17931 (source: NCBI BLink).
Link
InterPro Scan - TAIR