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13-4354-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17062888 [Map]; Strand: w
      • AT2G40890.1 - [+] show detail - cytochrome P450, family 98, subfamily A, polypeptide 3
        Distance: -2236; Region: intergenic
      • AT2G40900.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 234; Region: intergenic
    Flanking Genome Sequence: 13-4354-1 - 5-prime edge 
    CTTAGCAGTA CCGAAAGAGA TTCCATATTT TTCTGACTAA AGTTTTTGTC 
    AAGTAATATA GTCATTTTCT TCAATATGAA TTGAGATAGG TGTTAATGGG 
    CTCTGGGCCG AGAATATTTT TAAGCAGAAG GCCTGACACT AATAAAAAGC 
    AATTACATTT TGGTTTAATT CCCGGTTATG TTATTGTTTT TGACTTTTGT 
    TATGTTTGCA TTTGTTGGCA GAATGTTTTC GATATACGTA CATCAAAAAT 
    ATGGAACAGT GAGTAGTGAG TACATTGTTA ACACACACAC AAAAAAACTT 
    ACGATTTTTT TTTATAATAT AGTTCACTAA AACCGCCGTA AAAATGGTAT 
    GTAACANATG CGTACCAATA CCAAATGTAG TGATTACACG GGATTGTNTA 
    GCTAGTCAAC GATCAAAATC GAATCCCTTA NTTNCAATAA GAAATCAAAA 
    CTATAAATAA AATATAAAAC TTTTGAAGCA GGGGAAAAGG AATT

AT2G40890.1

Model type
Protein coding
Short Description
cytochrome P450, family 98, subfamily A, polypeptide 3
Curator Summary
encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.
Computational Description
cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G40900.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G56620.1); Has 4454 Blast hits to 4441 proteins in 784 species: Archae - 39; Bacteria - 2478; Metazoa - 2; Fungi - 0; Plants - 1222; Viruses - 0; Other Eukaryotes - 713 (source: NCBI BLink).
Link
InterPro Scan - TAIR