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13-4478-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 352850 [Map]; Strand: c
      • AT1G02020.1 - [+] show detail - nitroreductase family protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G02020.2 - [+] show detail - nitroreductase family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 13-4478-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTGGNNGGAC 
    TCAGGATGAC CNGGACGAGC NGTGAANCGN TCGNNTANAA GATGNACCTT 
    CNNCAGAGAA ANGGNNAAGA CTCGCGNANG CATGGCATTG NTNGATNCNG 
    NGNTNGNCTG NGCNCTNGNA TCATTCTGAA GATAGCACCG CAATCCATGG 
    TGTGCTTNAN ATCCCGGNTT GCCGTNTGCT GTNCAGGTAC AAAACTNNGC 
    CCAACAACAC CCGTNTCCCA NAACAGGNGA GGGTACATCC ATGAGCCCTT 
    CTCCCGCAGG AGCTGGTTCA AACCAGANCT ACCATGCCTA AGCTGAAGCA 
    TCCATCCCCT GCAATGTCCT GCATCCATCA ACCANAATGA TTCACTAACC 
    AAGTGATATA TATATGTGAG TTACAACTCT ATCCGAATCT GTACCTGATG 
    ACATGATANC CCTTTTGCCA TCCTCTGGNA NTCACCCTCG GCGAGCTTGT 
    ACAGAGGAAG ATTGTCCGGG CATCCATCTG GTTTCGTCCA CTCAAATTCA 
    GGCCTCGTAG CTGTCTTGAG ATCACTGAGA TGATCCTCGT TTCTGACTAN 
    GAGATACAGN CCCTTANGCA AACCCGAAAC TCTGTGAACA AACAAGGCAA 
    GATGAACCTC ATCAGTATCC CAANGAAGAG CTCNAAACGG CAGCGCANGT 
    TGCTCTTTNT GGGACTCGCC NGTGGAAGGA ANACAGTGCA TNAACNTCTG 
    GTAAAACNAA NACNTGTCTA TNCAAGTNAC AGCGTCCATA TN

AT1G02020.1

Model type
Protein coding
Short Description
nitroreductase family protein
Computational Description
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 762 Blast hits to 681 proteins in 314 species: Archae - 126; Bacteria - 594; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02020.2

Model type
Protein coding
Short Description
nitroreductase family protein
Computational Description
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR