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13-4493-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4654939 [Map]; Strand: c
      • AT1G13600.1 - [+] show detail - basic leucine-zipper 58
        Distance: -3470; Region: intergenic
      • AT1G13605.1 - [+] show detail - LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 24...
        Distance: -3599; Region: intergenic
    Flanking Genome Sequence: 13-4493-1 - 5-prime edge 
    TCTAGATCAA CACACAACAC AAGGTTTTAG AATGAAGGAA AAAAAAAANA 
    NACANGCTAC CAGCCNGGGC CGTNNACCAC NCGNGCCCTA NNGGGNGTNG 
    TTTTACNGGN GGNNGGGGNN GNCNNCCNGG CGGGCCTTNT AGNTNTGNAN 
    NNNNNGNNNN NNNNANNNAN GGNNNAGAGN TNNGAGGGGG NGTNNNNNAN 
    TGGNNNNGGN GNNAGNTTAN NTNGNGGGTG NANGGNNNNG NNGNAAANNA 
    NGAGTNGGNG NTGNNGTGGG GCGGGGNGAN GNNNANNGNN NNNGGGGNNN 
    NGNAGANANN NGNGANGGCC GNNNNGCGNG GTGGNGGGNG ATGNGGGGGN 
    AGGGAGGNNA CTANGATGCT NGTCNNAAAN TNTNNNTNTN TNNNAGNNGG 
    NNGGGGGATN NNTANNNNNG NNNGGNGGGG NGGTGNNGNG NGAGAGNNGN 
    GAGNGNNNAG CTNNGNNNNN GNATATNNGN GATGNGTAGA GNTTGGGNTC 
    GGGNNTNTNN GGGGNACNNG NGNGNGNNGG NGGGANGNGN NGGNNGNAGN 
    GNGAGNNNNG NNNNNNTTNN GAGAGAGANN GAGNGGNGTN GGGGGTGGGG 
    GANGGGCGNN CNNNTNNGNG NGNGNGNCTG CNNGCNTGNG NGNNCNCNTT 
    NANNGANNTN GNGTGNGNGA GGCAGTGNGC CNGGGNGGGT NTGTGNGTNG 
    GGGGGNAATA NNNNNNNNAG NG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4655056 [Map]; Strand: c
      • AT1G13600.1 - [+] show detail - basic leucine-zipper 58
        Distance: -3587; Region: intergenic
      • AT1G13605.1 - [+] show detail - LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 24...
        Distance: -3482; Region: intergenic
    Flanking Genome Sequence: 13-4493-1 - 3-prime edge 
    NTTNNANNCC CGNCTTCGNT GTTTGCCTCA GGTCTCCTTN CAAANGACGT 
    GACTANCCCT TANAAAAAAN GGNNGCTTAA AGGTCACTAT GTNATTCCTA 
    TGNNTGGAAA AAGATTTGAG NTCATNTTCA ACAGTTTCGA CCCGGNCACA 
    TCTAATCNCT CATAGCTATT TTTTTNTTCT NGGTGNTTCA TCGTNNTAGT 
    TTATCANTAA TCAAATTTTT ANACCCAATC TNATATTGAT ATTGTATAAT 
    TTATATAACC TGTTTCAGTG TTACCATGAT ATTTATTACG TAGGACTACA 
    GAAAAAATCG ATTTTTGTCG TCACCAGTAA CAACACATTC ATTTGTCAAC 
    GAGTTTTGAT CACCAGCCTA ACNTGATCAT CTAATGATTT TACCCACAAA 
    ANTCATAATA AAACTATTCT TTCAGTGATT AATTCTGCTA TAGTCCTATG 
    CTATGCGATG TTTCTGTAAG ACACACTTTT CAAAAGGACG TANATATTNA 
    ACATTAAAAA GTAAATTACA TCGNCNTTAT TNNTTCTCTN ATNNNNACAA 
    AACTTTNAAC TAANATTGTG GAANGTTAAA GGCACGGGGN TTACNGNGGA 
    CCTNATTTAA GTTGATGAAT AATNTNGNNA ATNGTNAATN AANTTTTTCT 
    TGGNTTAAGG CANNNAANAT TAGNGAANNG ATCNNNGTGA CNCTTCCGGC 
    ANNGANGGAG CTNACCTNTT AATNNNNAAC CNCC

AT1G13600.1

Model type
Protein coding
Short Description
basic leucine-zipper 58
Computational Description
basic leucine-zipper 58 (bZIP58); FUNCTIONS IN: DNA binding, protein homodimerization activity, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 48 (TAIR:AT2G04038.1); Has 2046 Blast hits to 2038 proteins in 142 species: Archae - 0; Bacteria - 6; Metazoa - 51; Fungi - 55; Plants - 1834; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13605.1

Model type
Protein coding
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR