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Mutant Lines
13-4630-1

13-4630-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4159231 [Map]; Strand: w
- AT1G12250.1 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: -34; Region: promoter
- AT1G12250.2 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: -34; Region: promoter

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCGAC TTCTTCTACA AAGTTGAATG TATCATTTCT 
CCCCTGCAAA GTTTTAGACT TTTAACAATG GCTTTCTCTT CTCTATCTCC 
TCTACCTATG AAGTCACTTG ACATTTCGAG ATCCTCATCT TCTGTCTCAA 
GATCTCCTTA CCATTTTCAG AGATACCCAT TGAGACGTCT ACAGCTAAGT 
TCCCGTTCAA ACTTAGAAAT CAAAGATTCA TCAAACACTA GGTGAGTGAG 
ACTCGAATAC TTTCACTAGC AAAACATAGA ATCTCAATGT TTTTCTTGTT 
ATTTGCAAAT CTTAGTGTCT TAGAAACTTA GGGGATTGAA TTGTTTTTCG 
AAAAGGGAAG ATTGTTGTTC CAGCGCTGAG TCAAATACAT GGAAGAGGAT 
TTTGTCTGCA GCAATGGCGG CGGCTGTTAT AGCCTCGAGC TCCGGCGTTC 
CGGCCATGGC AGAGCTTAAC AGGTTCGAGG CCGATACACG TGGCGAGTTT 
GGGATTGGCT CGGCTGCTCA GTACGGTTCT GCTGATCTCA GGTATCATTT 
AGAGTTCTTG TCTTAAAGTT CTTTAAAGAA TTTCATTTGT TTTTGATGGT 
GATAGACTGA TAGTTCGTTG AGATGAACTC TGTTTCTTTT GCAGCAAAAC 
AGTTCACTCC AATGAAAATT TCAGGTAAAA TTTGACTGTA GTTTGTCATG 
ATAGAGTTTA AAGCTACCAN CCCN

3 prime edge [+] show sequence

Chromosome: 1; Position: 4159183 [Map]; Strand: w
- AT1G12250.1 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: -82; Region: promoter
- AT1G12250.2 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: -82; Region: promoter

GAAGAAGAGA TGAATTTTGC ACGTGTGAAG GATTTCGAAC TTTATCCACT 
TTGCTTGGGC AAGGTGTGCA CACGTATGTC ACTTATGTTC ACCTGTTTTG 
TTCTTGGTTT TCTATTCTCT TCCAATTCCA AGTCTTTCAC AATTTACNTT 
TGACTTTGTT CTTCCTTGTG ACAAAGAACA CAGAAGCAGT AGAAACAAAA 
CAAATCAGAT CTTTAGTTTG GCTTTCAACA AAATTCAGTA ACAAGGTCAT 
GAACAGAAAC TTATTGCTTT GCTTATATAC CGATGTCTGC GTGAAATGAA 
TCCAACTAAA AAAAATCACA AGAATTTCAC AACGCAAACT ACTTTAGAAT 
GTGTAATACT CTTCGAGGTT TTCCGGATTG AAGTCGGGGT CTACAGGTGC 
ACCGTTCTTG ATCTTTGCTT GAAGCTCTAA ACTCTTGGGA AGTATAATCT 
CAATTCCTAA ACCTTGTGTA GAGAAATACC TCTCCAACAA TATCTGTAAC 
ATAAGATTCA ATAAGAAAGA TAGCAGTTAC ATTTCACGAA CTCGAGATTG 
TTTACTGTTC GCCTTACCAC AGCAGCATAT GCATCTGATC TGTTCTGTCT 
TTCACTCTTG CTAAGTCCCC TGAAATACCA TAATGCTCAA ACATTAATTC 
ANACACACCG NANTCGAAAT TTTCATGAAA GTTCANTGAT TTAAGGGTGT 
TGATANATAN ATNCCANTGT C

AT1G12250.1

Model type: Protein coding
Short Description: Pentapeptide repeat-containing protein
Computational Description: Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7687 Blast hits to 4280 proteins in 513 species: Archae - 134; Bacteria - 5724; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1589 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12250.2

Model type: Protein coding
Short Description: Pentapeptide repeat-containing protein
Computational Description: Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7775 Blast hits to 4220 proteins in 505 species: Archae - 143; Bacteria - 5794; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1598 (source: NCBI BLink).
Link: InterPro Scan - TAIR