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13-4654-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19059258 [Map]; Strand: c
      • AT5G46940.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -444; Region: promoter
    Flanking Genome Sequence: 13-4654-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATGTGTTCNG ACGNNANAGG GNCNCACCAG NNNNAANAAN TTNAACANNN 
    TNGGTNNAAG GGNCTCCNNA CNATTACCAT ACCTGGGCNN TANNCAACAC 
    ANGNCNCTGT ATTNGCTACC TTTAATAAAG ATAGTTTGTT TTCTTGTAAG 
    GTTTCTAAAT TGTCAATATT ATATGTATAT AGTACCAAAA AATTAAAAGA 
    GATCATATAT GTAAAGCGAA ATTTTATTTC CATCAATTAG ATTCTTTGCT 
    CTCAACTTTC TATAGTAAAC AAATTAATCG ATGTTATATG AACCACCTTT 
    GATAAATTTA TTACAACATA GTAGTAAAAG CCAAAGGAAT TACAATCGTC 
    TTATACAAAA TATTGTTCTC GTTAGTAATC GGAGACTTCT TTTCTGCTTC 
    CTTGAAATCA TCCTCGCAAT CGCCTGGAGC ATTCAAAGCA GCACTCANAT 
    TACTGTTAGC GCCGTCATAA TCACGCGATT TAATGTTCGC TAAAGCAGTT 
    TTTAAAGAAT CATTAGCATC TTTATAAAAT CCGAGGCAAA GTTTTAAGTC 
    TTCCACAATA TCCTGATATC TCTGGTCCTT GAGATCCTGT GCAACGATTC 
    CTTTCAGGTT CGTGATTTTT GCCGCAACGT TCTTTGTCGA TGCTAGGGCC 
    AAATCTTCNA NAGTANTTGC GGCTTTGCTT TGTGGATCTT GCGTAANANA 
    TTCNACNCAN AAATCGTNTG ACGATTGCGG

AT5G46940.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G46930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR