Home
Mutant Lines
13-4666-1

13-4666-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 18037451 [Map]; Strand: w
- AT4G38590.1 - [+] show detail - beta-galactosidase 14
  Distance: 0; Region: intron6 (CDS)
- AT4G38590.2 - [+] show detail - beta-galactosidase 14
  Distance: 0; Region: intron6 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA TAGATTGAGC TTTGTTTCTG TACAGTACCA 
TGGCGGAACA AACTTCGGAC GCACGTCTGC TCATTTCGTT ACCACTCGTT 
ACTATGACGA TGCGCCACTT GACGAATTTG GTACATCCAG AACCCAAAAG 
TTAAGCCATA CCAGCTTTGG GTCGTAATCA CAAGTTGACG GTTATTTTAT 
AGGTTTGGAG AAAGCTCCAA AATACGGTCA CCTAAAACAT GTGCACAGAG 
CACTTAGATT GTGCAAGAAG GCACTTTTTT GGGGTCAACT TCGCGCCCAG 
ACACTTGGTC CCGATACCGA GGTAACCTAA ACCAAAAATT ATGTTATCCG 
GTTTTTGTAA ACCGGAGCTT AACGATTCAA TACTGGTTTT GCAGGTTAGG 
TACTACGAGC AGCCAGGGAC AAAAGTGTGT GCGGCTTTCT TATCGAACAA 
TAACACAAGA GATACTAATA CGATTAAATT CAAAGGTCAA GATTACGTTT 
TACCGTCTCG TTCTATCAGC ATCTTACCGG ATTGTAAAAC AGTCGTTTAC 
AATACTGCAC AGGTGAGTAG AAATAACCGG TTCGATTTGG TTTAAAGAAA 
ATCATAATGT TTGATTTATC CGCATTGTTC TGAAACAGAT TGTAGCCCAA 
CACAGTTGGA GAGATTTTGT CAAGTCAGAG AAGACAAGCA AAGGTCTCAA 
ATTTGAAATG TTTAGTGAAA ATATTC

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 18037447 [Map]; Strand: w
  - AT4G38590.1 - [+] show detail - beta-galactosidase 14
    Distance: 0; Region: intron6 (CDS)
  - AT4G38590.2 - [+] show detail - beta-galactosidase 14
    Distance: 0; Region: intron6 (CDS)
Flanking Genome Sequence: 13-4666-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ACTAAACATG ACGCATATAA AAATCATGAT TTAAAAGTAC CATGTAGTAG 
TTGACATGGG ATC
```

AT4G38590.1

Model type: Protein coding
Short Description: beta-galactosidase 14
Curator Summary: putative beta-galactosidase (BGAL14 gene)
Computational Description: beta-galactosidase 14 (BGAL14); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: nuclear mRNA splicing, via spliceosome, carbohydrate metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 35 protein (TAIR:AT2G16730.1); Has 23317 Blast hits to 9736 proteins in 810 species: Archae - 62; Bacteria - 1372; Metazoa - 9840; Fungi - 2130; Plants - 1323; Viruses - 462; Other Eukaryotes - 8128 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38590.2

Model type: Protein coding
Short Description: beta-galactosidase 14
Curator Summary: putative beta-galactosidase (BGAL14 gene)
Computational Description: beta-galactosidase 14 (BGAL14); FUNCTIONS IN: sugar binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: nuclear mRNA splicing, via spliceosome, carbohydrate metabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 35 protein (TAIR:AT2G16730.1); Has 3072 Blast hits to 2969 proteins in 587 species: Archae - 15; Bacteria - 892; Metazoa - 685; Fungi - 433; Plants - 695; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink).
Link: InterPro Scan - TAIR