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13-4854-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1062318 [Map]; Strand: c
      • AT1G04110.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4854-1 - 5-prime edge 
    CTTCTGAAGG CTTATGTTAA TGCCACGGTG AAACCAAAGG CGCGGATAAT 
    TTTTGGTGGT ACGGTGATTG GGAGGTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1062434 [Map]; Strand: c
      • AT1G04110.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4854-1 - 3-prime edge 
    TTCAGAAGGA CTGACTCAGT GTAACCAATC AATGTAGCTG GTAAGAGATG 
    AACGTCAATA GAATCTTCTT CTTGGTTGAT CTCTGTATTG GCTAAGATCA 
    TTGCAACTCC TCCAGCTTCT TTAACCGCTT CTCCTTTCTC CGATCTTCCA 
    TTGACTCCGC GATCACAAAT CACCATTTTG CCTCGGATTT CTTCTCTTGG 
    AAGTGACCCT CTCAAACAGA ACTCACTTCC TTTATCTCCT CCTGTGACGT 
    AAATCACCTC AACCTCTCTC CCGGCATTCT TTATACCTTT TCCCGGATAC 
    AATGACTCTC CATAGAGAAG CT

AT1G04110.1

Model type
Protein coding
Short Description
Subtilase family protein
Curator Summary
Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.
Computational Description
STOMATAL DENSITY AND DISTRIBUTION (SDD1); CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 8825 Blast hits to 7601 proteins in 1230 species: Archae - 300; Bacteria - 5187; Metazoa - 188; Fungi - 495; Plants - 1932; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink).
Link
InterPro Scan - TAIR