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13-4858-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1527834 [Map]; Strand: c
      • AT4G03440.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -701; Region: promoter
      • AT4G03443.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4858-1 - 5-prime edge 
    TTTGCATGTC TAGTCTTTGG CAGTGCGAAG TTGGCTATGT CCCACTTGCG 
    ATAGCAATCT TGAGAACTAC AGGCACTAAG GGAGAAAGAC GAACTTTGAT 
    TGACGGTTGG AAACGTGGCT TTGAAGGCCA AGAATACAGG TTTGTTTGCT 
    TCTTACCATT AGTAGCTCCG AACTTGGGCA TGATGGCCAG TTTTTCCAAT 
    AATCAACTTA TTATTTATGG TATATGACAC TGTGGCAATG CAGAGCTCCT 
    TGTAGCAATA GTTGCTCTTA TCTGGGCTCA GTTGGGTGAT CTCGAAGACT 
    CGGACTCGTT CACAGAGCCT GTTAGTTGGC TTTGCCGTCA CTAGCCTTTG 
    CTCTAGTCTT CATGTCAGCC ACATTCTATC ATGCCTTGCT TGCTACAACA 
    AGTCACAATC TTTTTATAGT TCACTTCCAT CTTCTCGGTG CCACGTTTGG 
    AGCATTCTCC GCTTAAACCC CGCCTCAATT TTCCCCTGAA ATTATGCTGC 
    TTCTTTGGTT AGTTAAGGTT ACAGGGTCAC GTTGTTACTG TTTTGCCAAC 
    AATTTTAGAC TTTATTAATA GACGACTTTA AAGTCTTTGA CTTAAAACTT 
    AATGAGTGTT ANTTAGGTCT TTTTTTAATA TCTNGCTTTC CAANACACCT 
    TTCTGGTTTA ANACAAAGGC AAATACTCAA CCTTGATGTT NCCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1527986 [Map]; Strand: c
      • AT4G03440.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -853; Region: promoter
      • AT4G03443.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4858-1 - 3-prime edge 
    GAAAACGGNA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCAT 
    GCATAGCAGT ATCTCCACTC TGTCCTCTAG ATCACATAGA TTCAGTCTCA 
    ACCTCTCTCA GAGAGCCTAG CTGAATCCAT GATATCGATG CAACAAACGC 
    TTCAATAATA GCTAAGTGTT CAGCACGAGG AAGAACATGG TTTGGAGAGC 
    CACCTCTCGA TATATAATAC TACAATTTCT TCCATAAAGC CCCTTCTTAT 
    ATCGAGTCAA CAAAACATCT CGTCCCCAAA TAATGTCTCA AGAATACAAA 
    CAATGATCAA CTCGAGAACT TGGAGTTGGC TAGAAAAAAA AACACCAAGC 
    TCGAANACAA TACCAGGGGA CAGATGCTTC GTTTACTCGA CATTGTAAGG 
    GGTTTAATGG ATGAAAAAGT AGTATTATAT ATTAANAATG TGTTGATATA 
    CAATGACGAA GCTGATACCA AGTAGCTGAA ATTGAANAAC TGAAGATACC 
    AGATTCTNTA GCCACTCCGC AAACCTTCTA AAGCATCTGA AATTGAACAG 
    NGAAGTATNT AAAAAAGAAG CATCCAATGG CAGGTGAATT GAACAGATCA 
    ACTCCGCGAT GATAAGCATT CATAGAAAAA GAAGGCTCCA GTTTTTATAT 
    ATTGTCCATC CTCTTAAGCA AGAAGAAGTG GTCAAGCAAA CAAGACATGA 
    TCCAAAAGAA GAAAGCGTTG AATGGATAAT AAAATATTCA ACGACTTACT 
    GGTTTCTNTG AACTTGATTT GTTAGT

AT4G03440.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03480.1); Has 18202 Blast hits to 9223 proteins in 460 species: Archae - 22; Bacteria - 1330; Metazoa - 10010; Fungi - 1278; Plants - 2395; Viruses - 41; Other Eukaryotes - 3126 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03443.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR