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13-4861-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1533363 [Map]; Strand: c
      • AT4G03450.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -1583; Region: intergenic
      • AT4G03455.1 - [+] show detail - MIR447B; miRNA
        Distance: 2063; Region: intergenic
    Flanking Genome Sequence: 13-4861-1 - 3-prime edge 
    GATGTAATGG AAAAGACTAT GACAAGTCCT CTACAATTTC CTACTGTAAT 
    AACCACCCAA AAATAGAACG CAGGGCATGC AGAATATAGC AAAAAACAGT 
    AATGGTGACG CCACTTAAAA GGATCTGCGA GCGAGTGTAG GATC

AT4G03450.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 22492 Blast hits to 11630 proteins in 488 species: Archae - 24; Bacteria - 1675; Metazoa - 12211; Fungi - 1719; Plants - 2554; Viruses - 43; Other Eukaryotes - 4266 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03455.1

Model type
miRNA
Short Description
MIR447B; miRNA
Curator Summary
Encodes a microRNA that targets several 2-phosphoglycerate kinase-related family members. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UUGGGGACGAGAUGUUUUGUUG
Link
InterPro Scan - TAIR