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13-4870-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2557371 [Map]; Strand: w
      • AT1G08150.1 - [+] show detail - Cation/hydrogen exchanger family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-4870-1 - 3-prime edge 
    TGGATCAGAG CTGAAGTTTC TAGTGTGCAT TCACAAAGCA GACCACATCT 
    CAGGGATGAT CAACCTTCTA GCACAGTCTT TTCCTCTACA TGAATCCACA 
    ATAAGTTGCT ACGTGATTCA CCTCGTCGAG CTTGTGGGTT TAGACAATCC 
    AGTCTTTATC TCCCACCAAA TGCAAAAAGC CGAACCTGGA AACCGGTCTT 
    ATTCAAACAA CGTCCTAATC GCTTTTGATA ACTTCAAACA TTACTGGAAA 
    TCGATATCGC TGGAATTGTT CACATGCATC TCAAACCCTA GGTACATGCA 
    TCAAGAGATT TACTCGCTCG CTCTCGACAA ACAAGCT

AT1G08150.1

Model type
Protein coding
Short Description
Cation/hydrogen exchanger family protein
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
ATCHX5; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 6A (TAIR:AT1G08140.1); Has 2700 Blast hits to 2678 proteins in 819 species: Archae - 128; Bacteria - 1881; Metazoa - 0; Fungi - 113; Plants - 529; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR