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13-4927-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 357970 [Map]; Strand: c
      • AT1G02030.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: -712; Region: promoter
    Flanking Genome Sequence: 13-4927-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    AAGACGCCAA GTGTAATTCA TATAAATCCA TAAACTCTAT ATATAAACTC
    ATGCACTTAA TTGTATATAT GTAAAGAATA TAAACGAATG AAAGTTAAAA
    GAATATAATT AGCAACTTAA TTAAATTAGT CAGTCGTCAA GACCAATCAC
    CACTTGCGAG TTTTAACCAC GAAGATGAAG TAGCGTTGTG ATTATTGCCA
    CCACCATCTC TCTCGATCAT CCCTACGCTC ATGGCCGTTG GATCGACGGA
    ATATTCTTGG CAAGCTAAGT TGAGATCGAG AGATGGTTGA TCTAACGGCT
    GCGGTCTGCC GACGGAATGA TGATGATCGT GGAGCGACGT CATACGAAGA
    TAATTGGAAG GTGTTAGCCA ATGGCATCGC TTGTGGCCTC CTAAGGCCTG
    TCCCGAAGAG AAGACGCGAT GGCAGATGGT GCATTCGTGA GCGTTGGATC
    TCTTTCTTGC GATATGAGCC GTTGATTTGT CTTCCTCATC CTCCTCCTCA
    TCTTCGTCCT CGTCGTTGTC GTCGTCGTCT TCTTTGTATT CCTCTTCCTC
    TTCCTCTTCT TTATCTTGAG AGGCAAAACA ACCCTTCACT TTCTTGTGGC
    TTGCCCTGTG TCCACCCAAT GCCTGATGCG ACGTGAACAC CTTCTTGCAA
    GCT

AT1G02030.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 3215 Blast hits to 2725 proteins in 143 species: Archae - 0; Bacteria - 4; Metazoa - 2130; Fungi - 20; Plants - 967; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link
InterPro Scan - TAIR