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Mutant Lines
13-4955-1

13-4955-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 6715765 [Map]; Strand: w
- AT4G10955.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: 0; Region: exon8 (5UTR)
- AT4G10960.1 - [+] show detail - UDP-D-glucose/UDP-D-galactose 4-epimerase 5
  Distance: 0; Region: exon9 (3UTR)
- AT4G10955.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -40; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCGG CTCTTGAACT TAAAAGCTTC AGAAAGATAC 
ATTTCAACTA TCACCGAGCT GAAAACGACG TCGTATCAGC CTCAAGGTCC 
TTTTTGCCGT ATAGAGCTAA ACATTTGCGT TGTAGCTTTT CTTAACAAAT 
CTTTTTTGAT TATACAAGAA CATATCCAAA TCAATTACAG ACTAAGTATT 
GATTGTAATA ATAATACATA ATGTCCCTAT ATTTCCCTAA AATCTGACTC 
TTTATTGTTG TTGTTTTTTC TTGTGGATAC TATAATAATT TAGTGTGGAG 
AAATATGTTT TAGCAAATGA AGAAAACGAT TAAGAAAAAT TAATGAGAGT 
TGTCTTCAGA ATCATATCCA TAAGGATTAT TACTAGCCCA GTTCCACAAA 
TCTCTACACA TCTCCTCAAT CCCATATTTG GCCCTGCATT TGTTACCAAC 
CCAAATTTAG ACTTATCTCA TTTACATATT CCCAACTTTT TAGTGTCTAA 
CATACAATTT TGTGCAAGTA ATATCTTCAA AGTTATAGCT TTATGTATGT 
ATGAACTTAC TTCCAATTCA ATTCACTTTC TGCTCTTTCC GTCGAGGCGT 
ATACAACTTC AGCATCTCCC GGTCGAACNA TCCGGGGCCA NNCNACNNNN 
CTGGNNNNAN ANNNAAACTT TACTAAAATA NNNNNATTAN NCTNNTGAGG 
GNTTATAANN ATNACCNNNC

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 6715766 [Map]; Strand: w
  - AT4G10955.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: 0; Region: exon8 (5UTR)
  - AT4G10960.1 - [+] show detail - UDP-D-glucose/UDP-D-galactose 4-epimerase 5
    Distance: 0; Region: exon9 (3UTR)
  - AT4G10955.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -41; Region: promoter
Flanking Genome Sequence: 13-4955-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTCCGACCGT TTTCATCCCT 
TAGAGCCCAC ACACTTCTTC TCATTCTTTA TAAACATAAC ACTGGACAGT 
AACCAAACTT CAGATC
```

AT4G10955.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1); Has 218 Blast hits to 217 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 218; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G10955.2

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1).
Link: InterPro Scan - TAIR

AT4G10960.1

Model type: Protein coding
Short Description: UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Curator Summary: Encodes a protein with UDP-D-glucose 4-epimerase activity.
Computational Description: UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR