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13-4978-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18733421 [Map]; Strand: w
      • AT3G50480.1 - [+] show detail - homolog of RPW8 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-4978-1 - 3-prime edge 
    TACTGTGCTT ATCGATTTTT ACCAACAACG GCTNGGTACT AATGATTGTA 
    GTGCGGACAC CGTTTACGAC AGATATATCT TTTCCTTTTC TGAAGCGGTC 
    GTAAATGACT TGGGCTCCTA CTCCAAGAGC AGCCCCTATC AGAGGCCCAC 
    CCACTGTTTT GATTACAGCA AGCTCAACAA TCGGCATTTT TTTGGAAGTA 
    GTTCTTTAGC TCTCGTCTCT NTAGATGAAT ATAATTAGAG GAGCGATAAA 
    GAAGACGATC TGATAGCCGG GGCTGAATAT AGAGGAATCT ATGTTTATGG 
    AAGGATCAAG GATGGAACCA TATTAAATAG TCTTATGTTT AACAAGTTAA 
    CGTGTGGTTT TAATTATATG AAGACAAAAG AGATTGACTC ATAGACTTAG 
    TACTGTACGG GTCAACTCTC TTTTTTTCTA GGTAAGAAGA GATCGTTGGG 
    TTTATATGCA AATTGTCCTG AGTATTAAAT TACGTCGAAG AAGCGAGCCG 
    TCAATCGACG AAGTTGGCTG AGGAAGAACA GAAGAAGANA AACAGAGAAG 
    GAAGCCAATA AGCAGAAGAG GAAAANGGTG GTNTCAACTA NANATATTTC 
    ANCANAGAAG TNACTACTAN AAATAAATAC TTTTGCGTGT NGCAGNATAT 
    ATTTAANATT TAGAAANGAT TNATATTTAT AAAAAAATAT NATTNTGNNT 
    AAACAGTTGA ATAT

AT3G50480.1

Model type
Protein coding
Short Description
homolog of RPW8 4
Curator Summary
Homolog of RPW8
Computational Description
homolog of RPW8 4 (HR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808); BEST Arabidopsis thaliana protein match is: homolog of RPW8 3 (TAIR:AT3G50470.1); Has 106 Blast hits to 90 proteins in 15 species: Archae - 14; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR