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13-4984-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 357880 [Map]; Strand: c
      • AT1G02030.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: -622; Region: promoter
    Flanking Genome Sequence: 13-4984-1 - 5-prime edge 
    AATTAAGGAG TTCTAGTCCA ATATATACAA AGATATAAGT AAGAAATTAA 
    GTTTCACAAC TAGTTAATAT ACAAGATAGA TAATTGTATC ATTTTTTATT 
    ATTATATACG TTGAGAATAA AGTAAGATAA CCAAGGGCTC CTTGCTCATA 
    TAAGCGCAAA TGTTTTAATT TCATGTTTGT AATCTTACAG AGTGATATAA 
    TTTACTTGTT AAGCCATCAA GAAGGAGATA TAATTTTGAA GTTTTCCAGA 
    AAAGAAATTG TAAATTCGAA ATTAAGAAAT CACAAAGAAG AAAAATATCA 
    AATAAATAAA CGAATATCAC GTATCAAATA ACTCTCGTGA TATGCCCATA 
    TATATTTTAA TCATGTTAAT AATCAAAAGG CTCTTACTAC ACTGAAAACA 
    CATGAACATG AGTCAACGCC TCAACGGAAT TGATAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 357950 [Map]; Strand: c
      • AT1G02030.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: -692; Region: promoter
    Flanking Genome Sequence: 13-4984-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    ATGGCTCTCT AAATCTGCAG AAGACGCCAA GTGTAATTCA TATAAATCCA 
    TAAACTCTAT ATATAAACTC ATGCACTTAA TTGTATATAT GTAAAGAATA 
    TAAACGAATG AAAGTTAAAA GAATATAATT AGCAACNTTA ATTAAATTAG 
    TCAGTCGTCA AGACCAATCA CCACTTGCGA GTTTTAACCA CGAAGATGAA 
    GTAGCGTTGT GATTATTGCC ACCACCATCT CTCTCGATCA TCCCTACGCT 
    CATGGCCGTT GGATCGACGG AATATTCTTG GCAAGCTAAG TTGAGATCGA 
    GAGATGGTTG ATCTAACGGC TGCGGTCTGC CGACGGAATG ATGATGATCG 
    TGGAGCGACG TCATACGAAG ATAATTGGAA GGTGTTAGCC AATGGCATCG 
    CTTGTGGCCT CCTAAGGCCT GTCCCGAAGA GAAGACGCGA TGGCAGATGG 
    TGCATTCGTG AGCGTTGGAT CTCTTTCTTG CGATATGAGC CGTTGATTTG 
    TCTTCCTCAT CCTCCTCCTC ATCTTCGTCC TCGTCGTTGT CGTCGTCGTC 
    TTCTTTGTAT TCCTCTTCCT CTTCCTCTTC TTTATCTTGA GAGGCAAAAC 
    AACCCTTCAC TTTCTTGTGG CTTGCCCTGT GTCCACCCAA TGCCTGATGC 
    GACGTGAACA CCTTCTTGCA AGCTACCANC CCGGGCCGTN GACCCCNNNN 
    CCC

AT1G02030.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 3215 Blast hits to 2725 proteins in 143 species: Archae - 0; Bacteria - 4; Metazoa - 2130; Fungi - 20; Plants - 967; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link
InterPro Scan - TAIR