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13-5048-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 272074 [Map]; Strand: w
      • AT3G01750.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-5048-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGA CTCTAGACAC GTGAGATCCA GTTCCTGTTG 
    CATTGAGATT GGTCAGCTAA ACGTGATGGA TGAGAATCAT CATCTCAAGA 
    AATGCAGAAA CGCGTCTGTT AACTCTACAA CAGAGAGATT GAAGAGCGTT 
    TTCCACTGGC CGCGAGTCAA GAAACAACCT GGCCATTCCA AGAACAATTC 
    TGATATTAGC ATCATTTCGA CAACACTTGA GACGCAAGAA ACTCCTGTCC 
    CTCTCCGTCA GAGATTCTCA AAAAGCAGCA CTTCTTCCCT TGATCCGCCT 
    AATAACAATA AAAGAACGTT GGCGGTAAGA AGTAACCAGT CTAGTCCCAG 
    AGCCAAGAAG AAACGGTTTG GGTCGGTGCG GTCACGGTCG AGCTCATTCT 
    CGAAAATATC CATCCACTCT TCTTCCACTT CTTCGACTTC GAGCATGGTT 
    GATCTTAAAC AGAAGGAAGT GCTGATTGAT ACGAGCATAG CCGGACCATC 
    TGGATTGAAA CGGTCAGAGC CGGTGAAAAA TAAGGTAAGC GAGAAGCAGG 
    GTTCGGTGAG GAGTAGATTG AAGAGCCATT ACTTCTGCTT TGGTACTTCA 
    GCTTTGTCAG TGAAAACGCC GGCTACTGTC TTGGTATAAA CCAGGTTATT 
    GGGTATAGAA CAAAACCGGT TTGGTATTTA GTTTNGGTCT TCTACCTGCA 
    GTTTTCGTTT CTAGCACCAA NCCGNCTGGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 272057 [Map]; Strand: w
      • AT3G01750.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-5048-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    TCTTTTCAGG CGCAACTTCA AGTCTGGTGC TTAGGAACAT CTCAGCGTCC 
    GATGTCTTGA AACGAGCTCC AGGGCTGTAA AAGTTTCCTC TGTCCTTCAA 
    GTGAGACGCG ACGACACTTG TGATGCTTTG ATCACGACAA CTTGAACATC 
    CCTCCGGCTG ATACGAGTCG TCGGAACAGG AGATCAGACG TTGGAGACAG 
    CGGCTTCTGC CTGATCAGAT CAAGCGGAGT CATACCAGCG TTGTCACGTA 
    TGTTTATATC AATGGATTTC ACAGACATAA GCATCTCAAC GAACTCCAGA 
    GGAACATTCC CAGAGATGGC CAAGTGAAGA GCCGTGCGTC CCTCATTGTT 
    CCTATAATTT ACAAAATCCC CTTGGGATTT CGAGGCTGCG GAAGTGATCA 
    GACGGTTCAT GAGCTCCGTA TGCTTGTCAA GCCTTTCGAA CGCAGGAGTC 
    TGGAAACCGG AGATTCCGGC GTGAAGGAAA GTATCTCCGG CGTTGTTTCT 
    GGCGGAGATC AAAGATGGAG ATGCCGAGAT GAGAACATCC ACAAGATCAG 
    CGTGGCCACG GTAAGCTGCA ACGTGCAAAG CCGTGTTCCC TTGGTTGTCC 
    ACAGCGTCAA CTAAATGGTA TGATGAAGCC ACAAGCTCTT TAACCACCTG 
    CATCATAATC ACCAAGATCC GTAATTTTGT TCATCTATCG GTTGATATTT 
    TTANTTATAG CANNGGCCGG ANACACT

AT3G01750.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G04140.1); Has 30372 Blast hits to 15038 proteins in 745 species: Archae - 53; Bacteria - 2422; Metazoa - 15116; Fungi - 2165; Plants - 2906; Viruses - 97; Other Eukaryotes - 7613 (source: NCBI BLink).
Link
InterPro Scan - TAIR