1. Home
  2. Mutant Lines
  3. 13-5138-1

13-5138-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11030247 [Map]; Strand: w
      • AT4G20460.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 13-5138-1 - 5-prime edge 
    CNTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC ACGAGCTGCA TCGAAACAGG CACCCGAAAT 
    CCGTCCGTGT TCACGTAGCT CGGGCTTTGG AGCTTCTCCT AGTCTACCTT 
    CTGGATCTGA ACCTATCACG TTAAAGTATC TGTGGAAGTA ATAAAGATCA 
    TCAGACATTG TTTGGTTGAA CAAATCAGAG TCAGAGACTT GTTAAGGCTT 
    CAAGAAACGT GGAGCCTGAC CTTAGGATCA TGACTGCCAT GTCAGAGTTT 
    TTAGAGAAAT CCAGGATCAT ATCTTCAGCC ATCTTCTTAG CTTTTCCATA 
    AGGGTTAATG GGGACCTGAA AATCGATAAT TTCCGAATTT GAGGAGACAT 
    GATCATACTA CGAAAGAGAG CGTTTTCTGA AACTGTTTAG AATAGTACCT 
    GTGGAGTAAC TTCAACAATA GGCATCTTGT CAGGTTCTCC ATAAGTGGCA 
    CATGTGCTTG AATATATCAA CTTCTTCACT TTATGTCTAG CCACAGCTTC 
    AAGAACTACT AATGTGTTTG ATGTAATGTT GTGGTAATAC CTAAATAACG 
    AAAATCGACA TGAGATTGAT TAACCACAAA GAACTCCCAA TCTTGAGAAG 
    TCTTATGAAC AAAACAGTGG CTAGAGATTG TACCTTTAGA GGATCTAGAG 
    TGCTCTCTCC AACATATGCT ACTGCAGCAA AATGCATAAC AGCATTAAAA 
    CGCGTTCTCT GAAAANATTT TNTCAAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11030242 [Map]; Strand: w
      • AT4G20460.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 13-5138-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GCGTGATTCC AGGCCTTCAG GTAAATAAAA CACACTCATC TCTCAAAACT 
    CTCTCTATGC TTCTTTTTTA CTCAACTCTT ATAACTGAAA AAATGGATTC 
    AAACAGGTCA AAGGAACAGA CTACAAAACA GGAGATGGAA CTTTGTGTTC 
    GTGACTACAT AGATGTTACT GACCTTGTAG ATGCTCACGT AAAAGCTCTC 
    GAGAAAGCTA AGCCTAGAAA TGTGGGAATA TACAATGTAG GTACAGGAAA 
    AGGAAGATCG GTGAAAGAGT TTGTGGAAGC ATGTAAGAAA GCGACACGAG 
    TAGATATCAA AGTAGATTTT TTGCCTCGAA GACCTGGAGA TTACGCAGAG 
    GTTTACAGTG ATCCAGCAAA GATTCTGAGA GATCTTAATT GGTCTGCTCG 
    TTACACTAAT CTTCAAGAAA GTCTTGAGGT TGCTTGGAAG TGGCAAAAGA 
    CTCATCCCCA TGGATATGCT TCTTCTTAAA GACGACCAAG AAAGAAAAAA 
    AAGTTTTAAT TTTAAACTTT TTACATAATT GTTTTTGAGA GATTAGCTTA 
    TAGAAAAAGA ATTGATTTAT TACAGAATTA CAGTTCAATA AGTATTATTA 
    TTATGGTAAT TTGATACAGT TTACAAGAGT TGTCGATGTA ATCAGNGACT 
    TTNTTTTTAA AAGGNTCCNN ANTNCCNNCC NGGGCCGNNN ACCANCNNNC 
    NNNT

AT4G20460.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity; INVOLVED IN: galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G30620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR