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Mutant Lines
13-5192-1

13-5192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 3792996 [Map]; Strand: c
  - AT1G11290.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 13-5192-1 - 5-prime edge
```
ATCTCCACTG CTTTGGTTGA TATGTATGCG AAATGTGGAT CTCTGGAAAC 
TGCTCGGCAG CTCTTTGATG GGATGTTAGA AAGGAATGTT GTTTCATGGA 
ATT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 3793112 [Map]; Strand: c
- AT1G11290.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)

GTGGAGATAT TGACAAGAGA ATCAAATCCA GACCGCATAG CATACCCATG 
AATCTCCTTG CCAACACTAA TCAACCTCAA AGCAGAGACA GCAGGCAAAA 
CAGAAACAAT AGTGATAAAA CTAGGCTTCA GATTCTCCTC ACACATTGAC 
TTAACCATTT CCAAAGCCAT TCTCGCCATC CCATTCTGTG AATACCCAGC 
CACAATTGTA TTCCAAGAAA CCAAATCTCT CTCAGGCATT CTATCAAACA 
CCTTGCGGGC CTCATTTACC TGCCTACACT TGGCATACAT ATTCTCAAGC 
CCAGTCATGG CAAACAAATC CAACGAGAAC CCACTCTTCA CCAACAACCC 
ATGAATTTCC TTTCCAACCC TGAGCTCTGC TTCGTCTCCA CAAACTTTGA 
GGAGATAAGT GAAGTTATAC ACAACAGGCT CTACATCATC ATACCTCATC 
CGAACAAAAA AATTCAAAGC T

AT1G11290.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Curator Summary: Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.
Computational Description: CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink).
Link: InterPro Scan - TAIR