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13-5207-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23919020 [Map]; Strand: c
      • AT5G59290.1 - [+] show detail - UDP-glucuronic acid decarboxylase 3
        Distance: -828; Region: promoter
    Flanking Genome Sequence: 13-5207-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTAACACCAA CCAAACTAGA AGTATGACTT 
    ACGTTTTATC AACACTAAGC ACATGATTTC AATTTGACAT CTTTAGTCGT 
    CGGATCATTG TTAACTATAT ATTGGCTCTA TTGACAGAAT AAAAAGCAGA 
    AGCTACACCT TCTTTTGTAA AATGAATAAT TGAATT

AT5G59290.1

Model type
Protein coding
Short Description
UDP-glucuronic acid decarboxylase 3
Curator Summary
Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
Computational Description
UDP-glucuronic acid decarboxylase 3 (UXS3); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR