1. Home
  2. Mutant Lines
  3. 13-5317-1

13-5317-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17976577 [Map]; Strand: w
      • AT4G38390.1 - [+] show detail - root hair specific 17
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-5317-1 - 3-prime edge 
    GTAAGTTNGT GGAAGTGANN NNNATGATGA AACCANCTGT GACTATGAGA 
    ANAATCAGCC GGANAAAGCT ACCANCCCGG GCCGNTNACC NCTGCGTNCC 
    TTTATGCAGN TAGNGGNATA TGTGGTTTTC GNGTCTATNN ACGCNNATGG 
    ATCAANTCTT TACCTTGAAA GGTGTCNGTT GCATTACTGC NNGCTTANTN 
    CAAGTNGGAC ANTCTNGAGC TNCATAACTG GCGATCCGAC CTTCCGCCAT 
    TNTCCTGTGA CACGCATTAA TGATNNTGAA TGACCTGGAA AGTTTGTGTA 
    AAACCTCTGT GAAGCANAAN AGATTTTACG TACGGGTNCN CNAAATGGAC 
    TGGTTGGATT GGGTNCGACG GCCNCTTGAT TGTTNTGNNG GATCNATGGA 
    GGANGATAGN NGGTGNNANT NNNNNGNGAT GATNGNGNNN ANTNNNAGAG 
    NCNGGNNTNN CCCTNNGGNN TNNNCNGGTG GCNGNNNCTA NNGGTNNNNG 
    NNNTGGTGNT GGCGNNTTTC TNGNTNGGGT GANNTNNNTN NANTNNNNTN 
    NTNTNNTAGG NNGGGNNNNN NNGNGCNNGC GNTNCNGNNN NNGNCANNNT 
    NNNGGNGNNA GNGGNNNGNG NAGNTTGNNN TNGAGNCNNT NTGCGGNNNN 
    NNNCNCGGNN CNTTNTANGG NGTGNNGNTN TNTCNTNNGG NNTGNGCNNC 
    CNAGNGNNNN NCNNGNNNCN

AT4G38390.1

Model type
Protein coding
Short Description
root hair specific 17
Computational Description
root hair specific 17 (RHS17); CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G20550.1); Has 829 Blast hits to 827 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 829; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR