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13-5323-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3568440 [Map]; Strand: w
      • AT3G11385.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5323-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACTA TGCGGTCTTA CCTACAATGT ACCATATGCA 
    AATTTGCTCT GTGTTATCAA TGCGCTACAA TTCCAACGGA AGTAAGCTAC 
    AAATACGACA AGCACCCTCT TTCTCTATGC TATGGAGAAA AGGCAGATGA 
    GACGTACNTG GTGTGAACTA TGTGAGAAAA AGGTTAATCC AAGGGATTGG 
    TTCTACACAT GCAACGAATG TTGTATCACT ATCCACCTTC ATTGCTTATT 
    TGGATCTTCT TCTTATATGA AGCCTGGTTT TAGATTCAAG TATTACTCGT 
    CCAAAGTGGA AGTTCGTCGC AACAGTGTCA CTCGACCGAA TTGCGTTGAA 
    TGTGGTCATC GTTGTCCAGG TTACATCTAC TACAAAAACG ATAACTCTGT 
    AACGGTTACT TGTTCTTTGC ATTGTTTCGA GAAAAAGTTG ATACCGCTGC 
    AAACATGGNG AACTTTCCTT GCTATTTTGT TTTTTCATTT TTTCTTGAGG 
    GACTTGTAAC GNGACTTACT TCTAATTCTA AAGAATAAAA TCCTCATGAA 
    TT

AT3G11385.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR