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Mutant Lines
13-5349-1

13-5349-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24235122 [Map]; Strand: c
- AT5G60190.1 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: 0; Region: intron1 (5UTR)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCGTC TTTAGCTTAA GCTAGAACTG CTTCTTGTTC 
ATTCTAACCA CGAGCTAGAA CGTTATCAGT AACATGAGAT CTTAATGTCA 
AGCATAAAGG CTAACTAGAA AATGCTATTG ATGAACAGCT GACAATTCCC 
AGGGAATATG TAAACGTCAT CAGTTTGATA TTGGAAATTT AGATCACCTA 
ATTGCATCAA CCTATATGCT CAAGAAAATA TTATTTCATA CTTCGCATCA 
AAGATTGCAA AAGAAGCAAA GTTTCGTTCA GGCATTTTAT CGAACAGTTT 
GAGTGTATCA CAAATTGTTC TTACAATATC TACAAGCAAG GATCAAATTT 
CTCCGAACAA ATACAACCAG ATAAAAGCAG CGATTCTCGA ATT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24235131 [Map]; Strand: c
  - AT5G60190.1 - [+] show detail - Cysteine proteinases superfamily protein
    Distance: 0; Region: intron1 (5UTR)
Flanking Genome Sequence: 13-5349-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GGTTGCTTAT TGACAAAGCA ATTCATCTTT TTGAATCTTT CGATCCCTTA 
CTCACTTTTG TGTGCAGTTT ACTACTTTCT GAGAATT
```

AT5G60190.1

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Curator Summary: Encodes a protein that can cleave residues from the C-terminus of RUB1 to prepare it for conjugation to target proteins.
Computational Description: Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, NEDD8-specific protease activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR