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Mutant Lines
13-5353-1

13-5353-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 2714540 [Map]; Strand: c
- AT1G08570.3 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon5 (3UTR)
- AT1G08570.1 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon4 (3UTR)
- AT1G08570.2 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon5 (3UTR)
- AT1G08570.4 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon5 (3UTR)

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA CTCCAATCCC ATAAGAACTG AGCAAAACTC 
AAGTAACCAT CGGAACTGGT TTTGCTCTAG GTAAACCCAG AGGCCAAGAA 
CCGATTTTGC TCAGGGGACC CGAAAAAAAA CTAAACCCCA CTAAACCGGC 
TGGCTGCTCC GAGAACTGAC ATCTTTAGGT ACTGCAATAT ATCCAGCTGC 
TGCTACTACT ACTATCACGC AAACTATACA GGGAAATGTT TATTCAGTCT 
CATCTCCCTG CGGAGACCAA TGTTTTTTCG TCATTGGAGC TCATCGAAGG 
AAGAGGAACA GGGAGACTTG GGTTTGAATC AGGAGTGGCT GCTTCTTTCT 
CAACTGGCAC AGGCTTTGGT GTGTAAGTAA AGTTGAGTTC TTTGTTGGCT 
GCAAGTGCCA CAAGCTCTTT CTCTTCAAGG CCTTTGGTCG GTCCGAGGCT 
GCACCTATCT GGACCATGCT TTGCCAAGGC ATCTCTGAAT TTCTTGATCT 
GAAACAGATA AAACAAATCA AGATCAAAAT CGAACCTAAN ATGGTTTTTT 
CATTGATTGT CTCATGGATT ATAAGAATGA GAACGAACCG TGGCATTGGT 
ACAGCTAAAG CTGCAAACAC NACCCTGAGA GCCACGGTAG AATCGGAAAA 
AAGGGAGAAC ATGGACCCCA AGACTATAAC ACATGGACTT ATGCTCCTNG 
TANTTCACCT GAANAAACTG C

3 prime edge [+] show sequence

Chromosome: 1; Position: 2714583 [Map]; Strand: c
- AT1G08570.3 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon5 (3UTR)
- AT1G08570.1 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon4 (3UTR)
- AT1G08570.2 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon5 (3UTR)
- AT1G08570.4 - [+] show detail - atypical CYS HIS rich thioredoxin 4
  Distance: 0; Region: exon5 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
TTCAATCAGC TTCAGTAGAG TTTTGGTTTC TTTGTTTGTT TTTTATTTGC 
TTTAAGAATT TAATGTAAAT AAAAATCCAA TGAGGATTAT CATACAATGT 
CATGAAGGAT CTATGAATTA GTATCTAATG TTAGTATATA TTATGGTTTT 
TCCTAAGTTG GTACTTTCTC TGTTTGAAGT TTGATTATCA TACATGTATT 
TGTTATGGTC CTCTCTTCAA CATCTTTAGA ATAAAACATA TAAGATCTGC 
AAGGGCTTCA GATTTCTGTA GTGTGGTTAG TCTCTTGGGA CATTACGTTA 
CCATAGGACT AACGTCGACT ATATTAACGT CACCTAGAAA AAGCTCTAGG 
ATTAATGGTA CTTTTTTAGT TTGGATTAGT GGTACTTTAA CTTGGTTAAT 
TTTGCTGTTT CAGTGAGAGA AAGGAAAATT GAGTTGGGTT TTTATCAAAT 
TGCTCCATAT TCTAACTCTC CGTCAAAGGC ACCACATACC AGAAAGAATG 
AATACAAAAT ATGATATTTT GATAAGACAA AAATTAGATT GAGAAATTAA 
AGGATTCGGA AAACTTAAAT AAAATCATAT CAAACCCTCC ATTCCTCTGC 
TTCGCATNCT CCGGATGCAA AAACACACGT TTCACATTTT TGAAAGAATC 
TAACCAGACA TTTGANAAAC CTCTATCATC CGTTANAAGA AATGGGTTTA 
CAGGTATACA CNACACTCAT TCT

AT1G08570.1

Model type: Protein coding
Short Description: atypical CYS HIS rich thioredoxin 4
Curator Summary: Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description: atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 2532 Blast hits to 2524 proteins in 582 species: Archae - 19; Bacteria - 596; Metazoa - 625; Fungi - 365; Plants - 524; Viruses - 3; Other Eukaryotes - 400 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08570.2

Model type: Protein coding
Short Description: atypical CYS HIS rich thioredoxin 4
Curator Summary: Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description: atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 2537 Blast hits to 2529 proteins in 580 species: Archae - 19; Bacteria - 606; Metazoa - 627; Fungi - 356; Plants - 522; Viruses - 3; Other Eukaryotes - 404 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08570.3

Model type: Protein coding
Short Description: atypical CYS HIS rich thioredoxin 4
Curator Summary: Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description: atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08570.4

Model type: Protein coding
Short Description: atypical CYS HIS rich thioredoxin 4
Curator Summary: Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description: atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR