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13-5372-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22850485 [Map]; Strand: w
      • AT3G61730.1 - [+] show detail - reduced male fertility
        Distance: -10; Region: promoter
    Flanking Genome Sequence: 13-5372-1 - 5-prime edge 
    CCCACCGGAG CTATCATCTT CCCTCTACTA TCTCCTTCGG CATCACTAGA 
    TCTCGTCTTC ATTCTCTCTC TCTCTATCTC TCTTCTCACT CAGTATCTCA 
    CTAGTCGCTA ATTTGTTAAG CGGAAAATTG TTTCAGAATT TGGTTTTTGC 
    TCTGAACCGT GTAGCTGTGA TATATAGCCG CGAGGGAGAC ACAGCGAATT 
    TGAAAATTTC GAATGTCAAA TGACGTATAT ACCCCTGTAA CAAACTTTCT 
    ACCTCTGTAG ATTTTAAAAT TTTTAAAATA CTTTTCAATT TTAGTTAGAA 
    CCCGGTTTAG CACCAACAGA CGTAGCATTA ACCGAGAGGG TCCCAGTGAG 
    TGNGGTTTCC ATGATTATGA AAAATCAAGA TAGTATGGAT TTTTTTTAAT 
    ANAAAATTCA NAAACTGTAT TATGGAAAAT GTTAAAAGCT ATATTAACAC 
    TTCAACATTT TGGAACTTTA GGTTGNNGGC TGTGAAGTTA TTTTCTTAGA 
    GTCGGNGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22850369 [Map]; Strand: w
      • AT3G61730.1 - [+] show detail - reduced male fertility
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5372-1 - 3-prime edge 
    CCGGTGGGAG AAGGAAATGG TGGACGGAAG AGAAAATTGG TGCAGAGCAA 
    CGAACAGAAG AACGATATTC AGAGAGAAGA AGATGGTAGA GCTAAGAGAA 
    GAATCGTTCA GAGCAGCGAC CAGAAGAACG GGAAGATCCT CAGAGGAATT

AT3G61730.1

Model type
Protein coding
Short Description
reduced male fertility
Curator Summary
Encodes a nuclear localized F-box protein that is involved in tapetal layer degeneration and pollen development. Interacts with ASK1 and that interaction is mediated by the F-box domain.
Computational Description
REDUCED MALE FERTILITY (RMF); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36000.1); Has 49 Blast hits to 49 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR