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Mutant Lines
13-5375-1

13-5375-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4159834 [Map]; Strand: c
- AT1G12250.1 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: 0; Region: intron2 (CDS)
- AT1G12250.2 - [+] show detail - Pentapeptide repeat-containing protein
  Distance: 0; Region: intron2 (CDS)

CAAACTACAG TCAAATTTTT ACCTGAAATT TTCATTGGAG TGAACTGTTT 
TGCTGCAAAA GAAACAGAGT TCATCTCAAC GAACTATCAG TCTATCACCA 
TCAAAAACAA ATGAAATTCT TTAAAGAACT TTAAGACAAG AACTCTAAAT 
GATACCTGAG ATCAGCAGAA CCGTACTGAG CAGCCGAGCC AATCCCAAAC 
TCGCCACGTG TATCGGCCTC GAACCTGTTA AGCTCTGCCA TGGCCGGAAC 
GCCGGAGCTC GAGGCTATAA CAGCCGCCGC CATTGCTGCA GACAAAATCC 
TCTTCCATGT ATTTGACTCA GCGCTGGAAC AACAATCTTC CCTTTTCGAA 
AAACAATTCA ATCCCCTAAG TTTCTAAGAC ACTAAGATTT GCAAATAACA 
AGAAAAACAT TGAGATTCTA TGTTTTGCTA GTGAAAGTAT TCGAGTCTCA 
CTCACCTAGT GTTTGATGAA TCTTTGATTT CTAAGTTTGA ACGGGAACTT 
AGCTGTAGAC GTCTCAATGG GTATCTCTGA AAATGGTAAG GAGATCTTGA 
GACAGAAGAT GAGGATCTCG AAATGTCAAG TGACTTCATA GGTAGAGGAG 
ATAGAGAAGA GAAAGCCATT GTTAAAAGTC TAAAACTTTG CAGGGGAGAA 
ATGATACATT CAACTTTGTA GAAGAAGAGA TGAATTTCCA GCCCG

AT1G12250.1

Model type: Protein coding
Short Description: Pentapeptide repeat-containing protein
Computational Description: Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7687 Blast hits to 4280 proteins in 513 species: Archae - 134; Bacteria - 5724; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1589 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12250.2

Model type: Protein coding
Short Description: Pentapeptide repeat-containing protein
Computational Description: Pentapeptide repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 7775 Blast hits to 4220 proteins in 505 species: Archae - 143; Bacteria - 5794; Metazoa - 1; Fungi - 0; Plants - 235; Viruses - 4; Other Eukaryotes - 1598 (source: NCBI BLink).
Link: InterPro Scan - TAIR