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Mutant Lines
13-5385-1

13-5385-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 19093226 [Map]; Strand: c
- AT1G51480.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
  Distance: 0; Region: exon2 (CDS)

CACACAACTA TGGAAGAACT TAAGAATGGA CGAGATGATT TGTTAAGAAG 
AGTTTCCATA GAAGAAGATA AAGGTTTGCA ACAGCTTGCT CAAGTCAAAG 
GATGGATTTC AAGGGTAGAA ATTGTTGAAT CTAGATTCAA GGATCTGCTT 
GAGGATAAAT CAACTGAAAC TGGAAGATTG TGTTTGTTTG GATTTTGTTC 
TGAGAATTGC ATATCAAGCT ACAATTATGG TGAAAAGGTA ATGAAGAATT 
TGGAAGAAGT TAAAGAACTT NTATCTAAAA AACATTTTGA AGTGGTGGCG 
CATAANATTC CTGTACCTAA GGTAGAGGAG AAGAATATCC ATACCACAGT 
TGGTTTGTAT GTAATGGTTG AAATGGCATG GAAAAGCCTC ATGAATGATG 
AAATAAGAAC CTTGTGTCTT CATGGTATGG GGGGAGTAGG AAAAACCACA 
CTCTTAGCTT GCATCAACAA CAAATTCGTT GAACTGGAGA GTGAATTTGA 
TGTTGNGATA TGGGTTGTGG TATCTAAAGA CTTTCAGCTT GAGGGTATTC 
AAGATCAGAT TCTTGGTAGA TTACNGTCTC GACAAGGAAT GGGAAAGAGA 
AACAGAANAT NAGAAAGCCT CACTCATANN CAATAACCTT AAGAGAAAAA 
ATTTGTGCTG NTGTTGGGAT GATCTCTGGA GCGAGGTAGA TCACCAC

3 prime edge [+] show sequence

Chromosome: 1; Position: 3790365 [Map]; Strand: c
- AT1G11280.1 - [+] show detail - S-locus lectin protein kinase family protein
  Distance: 0; Region: exon2 (CDS)
- AT1G11280.2 - [+] show detail - S-locus lectin protein kinase family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G11280.3 - [+] show detail - S-locus lectin protein kinase family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G11280.4 - [+] show detail - S-locus lectin protein kinase family protein
  Distance: 0; Region: exon2 (CDS)

ACTAAGAACT NCNANNTGCT GCTGNTTNTA ANATTTGNCN CACGGGTCTG 
AGATCNGCTT TTNTCTGTTA GCCANCCACA CANCCAGGCC GGAGGTGTNA 
GCTTNGCTTG AACCAGATNC CTACATACTG ATTNNCGANA GTTGTNAGTG 
ACCTGAAGAA TCCNTACCTC ATAAAATCCA CCANGGGANC TCATGAGTGA 
TGTCCCAATG TCGANNGACG TGAANTAGTT ATAGCTGCAT AGCCACANCT 
TAGGAGTAAA CTTAACCACA GAAACCAAGG AAAGAGANCA ATACCANTCT 
NTCCNNAGTG TATTCCCATG TGNGNAAAAG ANNNNTNCTT CATATCACCN 
GNCCGGGCCN TNNACCACTC NTGGCCCTAT NAGGATTGCT TGAACTNTAA 
TTATATTNCC CTATAATTTA GGAAAAATGT AATTTGCTTA AGATATATAA 
TTTAAATTCG AAAAAGANTT ATTGNTATAT GAAGATGCCT ATTCCAAGAA 
ATATCTAAAG TTTATCACTG ATAATAAAAT TATTTATCGA ACATGATTAT 
TGCAAAGACT TTTATTGGTT AAATCATAAA TTAAAGTTTG NTCAAAATCT 
CCATCGCAAG TTATTATTCN ATTTATAACA TAAGGCACTG TTGTTCATAN 
ACNCNATACA AGGATTGATT GNCNTCANTC TGAAAATTGN NAAACNAACA 
TGGNNNAAAG TTNANTNGGG TAACCGG

AT1G11280.1

Model type: Protein coding
Short Description: S-locus lectin protein kinase family protein
Computational Description: S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119990 Blast hits to 118206 proteins in 4416 species: Archae - 104; Bacteria - 13409; Metazoa - 44077; Fungi - 9917; Plants - 34701; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11280.2

Model type: Protein coding
Short Description: S-locus lectin protein kinase family protein
Computational Description: S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119975 Blast hits to 118187 proteins in 4400 species: Archae - 104; Bacteria - 13364; Metazoa - 44144; Fungi - 9898; Plants - 34683; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11280.3

Model type: Protein coding
Short Description: S-locus lectin protein kinase family protein
Computational Description: S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 119306 Blast hits to 117553 proteins in 4294 species: Archae - 104; Bacteria - 13114; Metazoa - 43962; Fungi - 9889; Plants - 34469; Viruses - 418; Other Eukaryotes - 17350 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11280.4

Model type: Protein coding
Short Description: S-locus lectin protein kinase family protein
Computational Description: S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G51480.1

Model type: Protein coding
Short Description: Disease resistance protein (CC-NBS-LRR class) family
Computational Description: Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43730.1); Has 15938 Blast hits to 15091 proteins in 593 species: Archae - 10; Bacteria - 511; Metazoa - 1779; Fungi - 142; Plants - 13275; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink).
Link: InterPro Scan - TAIR