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13-5410-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2328209 [Map]; Strand: w
      • AT1G07560.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-5410-1 - 5-prime edge 
    CTGTTCGGTA ATACTTTCCA TCCTTTCTCT TCAGGTATCC AGAAGATGTC 
    CATGATCGTC TTTGGAGTCC ATTTTTCATG CCGGAATGGA GACTGTTAAG 
    AACAAGTCTC ACGGTCAACA CTTCTGATGA TAACNGGCTA TGACATACCG 
    GAAGACGTAG TGGTTACGGC AGCCACACCT GCAAATGTGA GTTCACCATT 
    AACCATTTCT TGGAATTTGG AAACACCTGA CGACTTAGTT TATGCATACC 
    TCCACGTCGC TGAGATCCAA TCCTTAAGGG AAAATGATAC CAGGGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2328093 [Map]; Strand: w
      • AT1G07560.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-5410-1 - 3-prime edge 
    CCGAACAGTG TATCCAGTGG AAACCAATCT ATTCATTACC AATTGGTTTT 
    GAGTTGGCTT ACCGAACAGT TTCTTTGGAA TCAGTCAAAT GGACGCGGAA 
    CAATGTCTTG AGGGAACCAG ATTGAGGAAT ATAAGTATTA TTTCTCAATG 
    GTCGTAGTTC TAAAGCTGAT ATTAGCGGCG TAGTTGTTCC CGTCTTAACA 
    AGACAAATCT GCAAAGAAGT TGACCTTGGT ATGTGAATGA TTTCTGCCCT 
    TGTTCCGTTT ACATTTCTTT GCAAATCGAC CGTGGTCCAT ATATTTGGAC 
    CAAGATAAAG GTCGAACTTT GGGTGTGTGT TAAGATTATC GTAGTTTCCA 
    TAAGTAAACA TGGCTACGAT CAGATAGTTT GTGCCTTGTA TGACGGTAAG 
    AGTATAGCAG TTTCGTACTC CATCTGGAAA ATATCTCAAA ACCGTGTATG 
    GCTTTATATA CTCCATCCCC GGAACATTTT GAATCTTGCC GCTTTTTCCA 
    CTTTTGATGA AATCGGCGTC TGATGTGAAT GTTAACTTTG TTAATGGTTC 
    GGTATAAGGA GACTCATCGG CT

AT1G07560.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 156630 Blast hits to 118524 proteins in 4343 species: Archae - 91; Bacteria - 13045; Metazoa - 42701; Fungi - 9322; Plants - 73192; Viruses - 348; Other Eukaryotes - 17931 (source: NCBI BLink).
Link
InterPro Scan - TAIR