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13-5452-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4524889 [Map]; Strand: c
      • AT1G13240.1 - [+] show detail - pre-tRNA
        Distance: -2107; Region: intergenic
      • AT1G13245.1 - [+] show detail - ROTUNDIFOLIA like 17
        Distance: 597; Region: intergenic
    Flanking Genome Sequence: 13-5452-1 - 5-prime edge 
    CACGCATGGG GATCGGNNGG TTAAACTAAT CCATTTTATT TCTGACAACA 
    AAAAGTCTAC TTTTATTTTA GTTCTTGGGA AAGCTACCAC ACAATTTTCN 
    ACATGTCCCA TGGTTNGGCT CAAACGTTTA TGATTNGNGG TGATTAACTG 
    TTGAGACAAG TGAGTTATCA AAGTAAGTCA TATAACACTA GTACTAATTT 
    CTTGTTGACA TTACAGTCTA AAATTATACT ATGCAATNAT CTATACTATA 
    ACAGGTAAAT TACTCAAAAT ACATTTGTAT TGAGAGGGAT GATATAATTC 
    AATAATTNGT GAGCGACTAT GTATATAAAC CAAGGGGACA CAATACTCAA 
    AATCATNAGT TTGGTNNGGT CCCTCTTNAT TTATATGACG TTATCAGTNA 
    ACCATNAAGT GCTANAATAA ATNNTNGGGC TATGATNAGC NAGTNTNNCC 
    GATTNTTNNA GAGGACATCG NNGATGTNTN AGNGTGNCTG NGTGNGNGAN 
    TTAGGANCAN CCTANNGTTN NGTNTNGTAA CATTTGGGAA CNGGANNNAT 
    NTGNTNNAAG TATANGNGNA AAGTGTACNC ATAGTANNNT ANANGGATNN 
    CANGGANNAC GTNACTAACC CTTNCTNNTT TGTGGGNGTN GANGNNNACC 
    NANTGANANN GNAATAGNNT CAAATNTTAG AGAGATNGTG GGTANNNANN 
    AAGGNNGGGN GTNNAGGNAG ANCTTNTGGG NNNAGAAGTN TGGNNNNAN

AT1G13240.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Ile (anticodon: AAT)
Link
InterPro Scan - TAIR

AT1G13245.1

Model type
Protein coding
Short Description
ROTUNDIFOLIA like 17
Computational Description
ROTUNDIFOLIA like 17 (RTFL17); CONTAINS InterPro DOMAIN/s: DVL (InterPro:IPR012552); BEST Arabidopsis thaliana protein match is: ROTUNDIFOLIA like 15 (TAIR:AT1G68825.2); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR