Home
Mutant Lines
13-5473-1

13-5473-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 19599915 [Map]; Strand: c
- AT5G48370.1 - [+] show detail - Thioesterase/thiol ester dehydrase-isomerase superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT5G48370.2 - [+] show detail - Thioesterase/thiol ester dehydrase-isomerase superfamily protein
  Distance: 0; Region: exon2 (CDS)

GTCTGTACAT TGTGATACAG CATTGTTCTG ATGATGATAG TACAACGAGG 
CCACTCTTGC TTGTTACAGC TTCTGTTCAT AAGATTGTCT TAAAGAAGCC 
GATTTGTGTC GACATTGATC TCAAGATTGT TGCNTTCTGT CATTTGGGTT 
GGTCGTTCAT CTATCGAGAT TCAACTCGAA GTTATGCAGT CCGAATTGAG 
TATGTGTATA GTCGTCTACT AATTCAACTT ACAAGCATGT ATCTTGAAAC 
TAGAAATTAA AAGACTTCTG TTTTGTTGTT GTTGTTGTTT TCAGAAGATG 
TCAAGGCTTC TTCAGATTCT GTTGCTTTAA CTGCAAATTT CATTTTTGTG 
GCGCGTGATT CTAAGACTGG TAAAGCTGCT CCTATCAACC GTCTTTCTCC 
TGAAACCGAG GTTGAGAAAC TTCTCTTTGA GGAAGCTGAA GCTAGGAATA 
ACTTAAGGAA GAAGAAGAGA GGAGGTGACA GAAGGGAATT TGATCACGGG 
GAGTGTAAGA AGCTACCANC CCGGGCCGNC NACCACNCGG CCCCNNNAA

3 prime edge [+] show sequence

Chromosome: 5; Position: 19600031 [Map]; Strand: c
- AT5G48370.1 - [+] show detail - Thioesterase/thiol ester dehydrase-isomerase superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT5G48370.2 - [+] show detail - Thioesterase/thiol ester dehydrase-isomerase superfamily protein
  Distance: 0; Region: intron1 (CDS)

GTACAGACAC ATTCAAATAC ACAATAAGAT CACTAAAACC TATACTAGAA 
ACATAGTCAG AAAATCAAAT ACACAATAAG ATCACTAAAA CCTATAATAC 
AACCATAGTC AGAGGACAGA GATTCACAGT ATCCTAAAAA AGGATCAAAC 
NTTTATCACT CAATTTGGCA AATGAAGATA CCTTGACGGA GATAGTGCCG 
GCTAAAGCAT CGAGATCTTC GAGCAAGATC CCGATACGGA CCTCGTTCCA 
AGGATCTCTG TATTGCTCTC TGAGAATGAA ATCAGTGGAG AAAGGGTAGA 
AAATGGTGGT ACGGCTATGA GAAGGAGTTC TGGTGAGAAG CTGGCTCTGT 
GGTGGAGCGT CTTTAGGAGG ATCGAGAAGA GATTCGAATA TTTTGGATCT 
GGCTTCCCAA AGAGCGGTGG TGACAGGTGA ATGGTACATA CCTGGCCATA 
AGCT

AT5G48370.1

Model type: Protein coding
Short Description: Thioesterase/thiol ester dehydrase-isomerase superfamily protein
Computational Description: Thioesterase/thiol ester dehydrase-isomerase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT2G30720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G48370.2

Model type: Protein coding
Short Description: Thioesterase/thiol ester dehydrase-isomerase superfamily protein
Computational Description: Thioesterase/thiol ester dehydrase-isomerase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT2G30720.1); Has 2835 Blast hits to 2174 proteins in 781 species: Archae - 49; Bacteria - 1954; Metazoa - 460; Fungi - 99; Plants - 81; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
Link: InterPro Scan - TAIR