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13-5503-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3765988 [Map]; Strand: w
      • AT1G11230.2 - [+] show detail - Protein of unknown function (DUF761)
        Distance: -1505; Region: intergenic
      • AT1G11240.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 24...
        Distance: 766; Region: intergenic
    Flanking Genome Sequence: 13-5503-1 - 5-prime edge 
    CACAAGTTAC TTGATTTTGG ACTTTATCAC GTAGTGATAA AATGAAATAA 
    AAGATCTTCG ACTCTTTCTT TTCTGGCTCG AAAATATCTT CTACCTAAGA 
    GTTAAGATAA ATCAAAGGCG TCTTCTAGGC AATAATCAAT GGATCAAACA 
    ATTCCAAAAT GTTTATTTCC TTAAGACGTG GCGAAGGTCG AGTTTCAATT 
    CTCAACGAAC ATACATTTGA CCATTATTTA AGGTAAATGT CGGGTCTAAA 
    GATCTCTCGT GTCCCTGTGC TACTAGCTGC TCTGATTTAT ATCAATATAT 
    CAAAACGAAG GATCTCTTTA GTTATTGTTT AACATTTGCA GATGAGTTAC 
    AAAAAAAATA TCAAAACGTG TAAACTGTAA CATAAAATGT AAGTAGTAAC 
    GAACTATACC CTCCTTGAAA CTATACAAAG ATTTGTTATA GACTGCAACT 
    TATGTGTTAC CTACATATAT TATATATACC ATATTCGGTA AGATTTCTAT 
    TTAGGAAATG TATTGAACTA AATAATTAGA TTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3765872 [Map]; Strand: w
      • AT1G11230.2 - [+] show detail - Protein of unknown function (DUF761)
        Distance: -1389; Region: intergenic
      • AT1G11240.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 24...
        Distance: 882; Region: intergenic
    Flanking Genome Sequence: 13-5503-1 - 3-prime edge 
    AACTTGTGGT TGTCATTTTT CAATAATGTA AGTGATAAAT TACGGGACCA 
    CGAAGTCACC ATGAGACTTG TAACCCTAAC AAAAACGTCT TAAAAATTGA 
    TGTCCTCATT TGTATCATAC AATTTATATA TTTATTACTA AATGGAACAC 
    CCACATGCAT ACGTCAATCT ATCAAGCCCG CTAACTAAAC GAAACGAATT 
    TGTGGGAGCG TAATTGATAT AGGCTACATA TCAATCCACC ATAACTAAAA 
    AAATTGATGG GAAGACCAAA TTCATAACAC AAACTCACAA AAGCATTGAA 
    CTATCACACA TCACAGATTC ACAATTCACA CAAAGCANAG ACATAACATT 
    GAGACCAAGG GGAAGCCAAT TAAACAGGCA AGGTTACAAC TTGCAANATA 
    GTATAGGTGT CTTGTTTTTN CTTTTGCTAG TATAATATTG TCTTGTTTAT 
    TTCTTATAAT GNNGCTTGTA TGTAAATCGA CCAAACAGTC AAGTTTAATT 
    TATGNTTACA TGCAAGGTAT ATATATNGAA AAATTAATGT TCAATGTGGN 
    NGNNGGNGCA GCANNAGANG ANANTNCGTT CNCGANTAAC GGANCTGCAT 
    TTTNTTTTGG GNTNGATNAG AANACAAGGN NTATNTNGTG NACCAGATNC 
    NTNCTNTNNA GNTNAACAGN AAGGACATGG NGGGTCNNCN NNCNNANTNG 
    NGNTTNTNTG NNNANNAGAA AGNNAAATAN NNANT

AT1G11230.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF761)
Computational Description
Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1).
Link
InterPro Scan - TAIR

AT1G11240.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink).
Link
InterPro Scan - TAIR