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Mutant Lines
13-5550-1

13-5550-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 257355 [Map]; Strand: w
- AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
  Distance: -715; Region: promoter
- AT5G01690.1 - [+] show detail - cation/H+ exchanger 27
  Distance: -55; Region: promoter

CCTCCTGCTA GGTATTTCCC CTAAAGAGTC AAGCCATAGA GGGAAAGAGA 
GAGATTGTGT TGTGAGTTGA AGAAAAGAAG AAAGTATTAA TTATTCTCTT 
CTTTTTTTTG TTTCTGCTCT CTCTAGCTAT ATTTAGGGGT TTAATTGTAC 
ATGTTGTTTA TCCTCTTGTT CTTTATTTCT CTTTAGAGGN CATCCTACTT 
TTAAGGTTTT CTATATATGT TTTCTGTGTG GTACAAAAAT CTTGAGCATG 
GTCAGATGAT CATCATTATA GCCTGAGATT GATTGCACAA ACATGTGTGT 
TTGTAATATA TATTTTGCAT GTTGATGTTA TAATAACCAA CCTAGCTACT 
AAATCCATGA AGTTAGATCC CTAACAAAAA AAGATTAATT AATAATCAAC 
CTAGTAATAC TCCTTAAAAG TATTAATTTA AAAAAGATCA GGATCAACAA 
AAAAATAAAA CTATAATAAA ATAAAAAAAA ATGTGTAAAA TACCAAAAAA 
TNCNTNTGCC AAAGGGNNAT ATGACATATA TAATTTCCTA TTTTTCTNTG 
ACGGGTTTAA TAAANNNAAC ACAAAANCCT TNNAAAANCN NCNNAAA

5 prime edge [+] show sequence

Chromosome: 5; Position: 257412 [Map]; Strand: w
- AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
  Distance: -772; Region: promoter
- AT5G01690.1 - [+] show detail - cation/H+ exchanger 27
  Distance: 0; Region: exon1 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCAGGGAA TGGAAAATAT AACCAAAACT TTTCAGTACG 
GAGGAGTTGA TTGGCTTTGC GAGCCATGGG TAGGTGCAGG CTCTTTGGGG 
ATTGGCCGGG GAGAGAATCC GCTCAAGTTT GCTCTTCCTC TTCTTCTCCT 
TCAGATTTCT GTCTTTTCCA TATTTTCCGT ATCTTTTCAG TTTCTTCTTC 
GGCCTTTTGG AAAATTTGCA TTCCTCACTC AGATGCTGGT ATACGTTTCC 
ATATCTAATC ATCTATAATT GGAAGCT

AT5G01680.1

Model type: Protein coding
Short Description: cation/H+ exchanger 26
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G01690.1

Model type: Protein coding
Short Description: cation/H+ exchanger 27
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: cation/H+ exchanger 27 (CHX27); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 26 (TAIR:AT5G01680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR