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13-5716-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4801761 [Map]; Strand: c
      • AT5G14840.1 - [+] show detail - expressed protein
        Distance: -1023; Region: intergenic
      • AT5G14850.1 - [+] show detail - Alg9-like mannosyltransferase family
        Distance: 136; Region: intergenic
    Flanking Genome Sequence: 13-5716-1 - 5-prime edge 
    CCTGAACTAA CGACCTCACT GATCATAATT AAAAACAAAC TCAATGATTA 
    GTTAACTTAC TAATTGCATA GCATCGGTTT TATTTAATCT GGATTAAACA 
    GATATTTTCT CAATTCGATA TAAAAGAAAG TGATAGGACA AAACAGTGCA 
    GAGAGATTGA GTACAGAACT GGATATAGCT TTCAATGTTT TTGCCACACA 
    ATGTCTAAAG AAAGCATATT TTGGTGTCAT TGACTCATCT TCTCATTCTT 
    TGCTATCATT GAGTGTACTA TAGTACAAAT TGTGGGGTTG TTTTGGAAAT 
    TAAATGGTGA ATAAACTAAG GATGAAACAA AACAACACCA TCTCTCTCAA 
    GTCTTTGGCT CACTCACTCT AGTTTAACTG CTTCCCCTAA TAGTGACATT 
    CACATGGTTA TGTTGAACAA TCAAGAAGCT ACTTACTAAT CGGTCATCAA 
    TTCAAATTGA TATTTGCAAG CAAGAGAATA TTAACTAGTA AGATTGAAAA 
    TTTAGAGTTA CTCAATAAAA TGAGCTTGAG ACTCTGTTTT TACATGTGAC 
    TTTAACTCCA AAGCTACCAA TAGTCCAAAA CTCTTGGGCT TTCTAAGAAA 
    AATAAAAGAC AAAAAGCAAT GCTTCTTTCT CATTTGGTAT ACGAATAGAA 
    AGGACAGAGA AGACAGGTTC GTATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4801832 [Map]; Strand: c
      • AT5G14840.1 - [+] show detail - expressed protein
        Distance: -1094; Region: intergenic
      • AT5G14850.1 - [+] show detail - Alg9-like mannosyltransferase family
        Distance: 65; Region: intergenic
    Flanking Genome Sequence: 13-5716-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATACTT 
    AGGTTCATTT AACAGTTTTT TGTTTTAACG ATTCTGTTTA TCTAAATACT 
    TATGGGCAAA AGAATGTGAT TAAGACTCTC TGTCGTCATA GAAATTAACT 
    AGTCTCAAAT TACATCACTG TTCTATCTAT ACTCATTGTT AACCGGGACA 
    TACNTGGAAC TAAAACAGAT ACCACGATTA GGCTCTTAAG GTACAAAATA 
    CTGTTTGATT GTGAGACAGA GGAGTTCAGA GAGGTTCTAA TGATTATAAA 
    AACCTTGAGG TTGCGTACTC TTATGGGAAT GCGTGGTTTA CAACATAGAC 
    GACCACTGAG GATTGAAGAT CTCGATCTAC CTTGAA

AT5G14840.1

Model type
Pseudogene
Curator Summary
pseudogene of unknown protein
Computational Description
expressed protein
Link
InterPro Scan - TAIR

AT5G14850.1

Model type
Protein coding
Short Description
Alg9-like mannosyltransferase family
Computational Description
Alg9-like mannosyltransferase family; FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum membrane, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR