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Mutant Lines
13-5737-1

13-5737-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 357831 [Map]; Strand: c
  - AT4G00840.1 - [+] show detail - DHHC-type zinc finger family protein
    Distance: -552; Region: promoter
  - AT4G00850.1 - [+] show detail - GRF1-interacting factor 3
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 13-5737-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTAATTGGTT GTGTAATGAT GTTTTTGAGT AGTTTAAACT GTTGTAATGA 
ACTTTCCTTC TTGAGTATAA TTTGTTTTAA AGTGTCATTG TTTTCCGCTT 
TAACTTTTTT TTGTTACTGG AATTGGATGT ACAATCATGA GTTTGGAGTT 
TTTTTTTGAG TGAAAACANA GTATTTGTAT GCATATGAAA TTTGAAAGCT
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 357817 [Map]; Strand: c
- AT4G00840.1 - [+] show detail - DHHC-type zinc finger family protein
  Distance: -538; Region: promoter
- AT4G00850.1 - [+] show detail - GRF1-interacting factor 3
  Distance: 0; Region: intron1 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA TAAACAGACA TTATGACTAA ACAACAGAAA 
GACAAAAAAT ATAGAAAGTA AAGTAGTAAC CTTTTGGATC TGTTCGGTGG 
TGATATTATT GGTGGGCGGA AATGAAGGAA GAACCATCGG AATCATCTGT 
GGAGATTGCT GCATCTTTTA TAATTCACCA ATCAAAACTC TGAAACAGTG 
AAACCCTAAA GTTTCTTCTC ACGATTATTA CAAAACAATA ATTCTGAGTG 
ATAGAATTGG TTTAAGAGCC CAATGCAAAA CAAACTGATG CAAAAATATT 
CAACAAACGA ATATTTTGGA TTATCCTTAA ATTTAAGACT TTTGATTTGT 
TTGAATTTCG CCGACGAGGT TTCTGGGAAA TCGTAGGACA AAAAAGTCCC 
CCAACCAATT AATTTGTCTC CCCCACCGAA TGTACACGTG GCACCTTGTC 
TGATTTTTCG TCAGCTCTAC GATAACCAAA AAAAGACAAC ATTTGTAGCT 
GTTATTATTT ATTGGGCCTG TTAATGGGCC TTATAAAGAA TTATGAAAGC 
TACCANCCCG GGCCGNNNAC CACCCCTGCC CCNNNG

AT4G00840.1

Model type: Protein coding
Short Description: DHHC-type zinc finger family protein
Computational Description: DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00850.1

Model type: Protein coding
Short Description: GRF1-interacting factor 3
Curator Summary: Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA
Computational Description: GRF1-interacting factor 3 (GIF3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 2 (TAIR:AT1G01160.1); Has 414 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 2; Metazoa - 279; Fungi - 27; Plants - 81; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR