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13-5773-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5271737 [Map]; Strand: w
      • AT3G15570.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-5773-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA TACTGTAGTG TAGTAGAAGA TGATTTTCTA 
    TAGAAGAGAG CAAAGTGAAG TGATGGTCTT TTTATTTAAA GTTTGGTTTT 
    ATGGTTTTTT GCTCGAAAAG CTCATCACAG AACATAATCA TGACTTCCAC 
    AGAATTTCAA AAAGTTTTGC GATTTTTAGA AACTAACGAA CGAATTAGTT 
    AGATTTCATT TTCGTGAAAA ATTGATAAAC ATAATATTTA TTGATACATT 
    GTAGCTGCCT AATAGTGACC GACAATCAAA TCGTAACATT TTTTCTGATT 
    TAAAATTGAA AAAAAAATAT TTCGTTCANA TAGAATTATT GACTATTAAA 
    AAAAAAAAAA AGNCCNCCNN NAAAAANTTT TTTTTTNTTT TTNGGGNTNN 
    AANTTTTTTT GGGNCCCCNN CAAAAAAAAA AAAANNTTNN TNNNCAAAAA 
    NNNNNNNGNN NAAAAAAAAA NTNAAAANTG GGGGGNNCCN AAAANNNTTT 
    AANTTNCCAA AANNNTTTGN AAAANTTNCC TTTTNGGNCC AAAAATTTNC 
    CCNNGTTTNA AAAANAANAA NCCGGGGNNN GNAANNNCCC GGNCCCNNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5271732 [Map]; Strand: w
      • AT3G15570.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-5773-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCAT 
    CAGAGCTCAC TGTGAAGAAA AAAACTCGAA ACAAATGAAG AAAACACTTT 
    CGCCGGAACC CGTCACCATC TACGGCAATC GCCAAGAAAC CTTCGTCGGT 
    GATATGGAGT ACTACACTTA CTTCGACGAA TCTTGTATCC AAGACATGAA 
    CTATTTCGTC AAAACAATCA CCGGCATCAA ATCCAAAGGA ATCAGACCAG 
    ACCTTATCGG TTCCATCATC GCTCATTACG CTTCAAAATG GCTCCCTGAT 
    CTCTCCGGCA ATGTCTCCGC CATTATTTCC TCCACCTCCT TAGAATCCAA 
    GAACAACCAC AATGACACAC AGCCAGAGAG CGTCACTGCA TCTGTAATGA 
    AGAAACGGTT TTTCGTCGAA ACACTAATCG GAATCCTCCC ACCGGAGAAA 
    GACTCTGTTC CTTGCAATTT CCTCCTCCGT CTCCTCAGGA CAGCGAAAAT 
    GGTCGGAGCT AATCCGAATT ATTTAACGGA GCTTGAAACC AGAGTATCGT 
    GGCAGCTCGA CCAAGCT

AT3G15570.1

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Computational Description
Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G52770.1); Has 825 Blast hits to 823 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 824; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR