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13-5779-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 591377 [Map]; Strand: w
      • AT1G02720.1 - [+] show detail - galacturonosyltransferase 5
        Distance: -449; Region: promoter
      • AT1G02720.2 - [+] show detail - galacturonosyltransferase 5
        Distance: -449; Region: promoter
    Flanking Genome Sequence: 13-5779-1 - 3-prime edge 
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCACC 
    CAACCTAACC AAACACCGAC CACATTTCGT GCCCGATAAA TGATCTAACA 
    TGATACCCTA TATAATAGTA TTAAACATAT CTTCTTTTTG CTGATTAAAT 
    ATAATATTAT TACTTTTGGG GGGTCGAATA ATGCTTTCTA TAACTACCGT 
    TAGCTACCAA ACTCGAGTGT TTGCTGATTA GAGAGAGCAA CATTATGATT 
    AAACAAATCT TAGCGTTAAA AGTAAGAACT TTTAAGCTCT TTTTAAATCA 
    CGATAAATTA GGCTCTCTCT AATCAGCAAA CAATTATTAA AGTGATTACT 
    GAACGGTAAT GAGTTAATGA CGATTCTTGT CTTGGAAATG AGGTCCCGCG 
    AGATCATAGA CCATTTAAAT ACGGCGTCGT TAAGACTGCA CAGTCTCACA 
    CTTGACCAAA TCGAATCTTC ATTATTTACT TATTGTTCTG CTTCAAGAAT 
    CTAACACGTA CCATATGAAC CATGAACAGA AGCT

AT1G02720.1

Model type
Protein coding
Short Description
galacturonosyltransferase 5
Curator Summary
Encodes a protein with putative galacturonosyltransferase activity.
Computational Description
galacturonosyltransferase 5 (GATL5); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 6 (TAIR:AT4G02130.3); Has 2014 Blast hits to 2000 proteins in 469 species: Archae - 0; Bacteria - 946; Metazoa - 269; Fungi - 2; Plants - 729; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02720.2

Model type
Protein coding
Short Description
galacturonosyltransferase 5
Curator Summary
Encodes a protein with putative galacturonosyltransferase activity.
Computational Description
galacturonosyltransferase 5 (GATL5); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 6 (TAIR:AT4G02130.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR