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13-5806-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3790928 [Map]; Strand: c
      • AT1G11280.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -116; Region: promoter
      • AT1G11280.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -52; Region: promoter
      • AT1G11280.3 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -52; Region: promoter
      • AT1G11280.4 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -116; Region: promoter
    Flanking Genome Sequence: 13-5806-1 - 5-prime edge 
    GGAATTGGTA GCGGAAAAAA AATTATTTCT TGCTACAGAG AGTACAAAAA 
    TAGAAAAATT CAAATCATTA AGATATGTTA TGTAGTGTGA GACAAAGGCT 
    TATTTTGGAC AGGGTTGATG TAAGATGGAG TTTTTAAATT AGAATAAAGT 
    ATTACAAATT TTTTATATGG TAACACACCT AAGGACAAGA TTGCATCTTC 
    TTCATCATTT CGGTTTATTA TAATGCCTAT TCAAAGAACG AGGTGTCAAA 
    TATAAAACAA TGCTATATCT TATGGGTAAT AACATTATAC GATACATCTA 
    GAGGAGTCAT TGTTTTCAGT TTTTCAAAAC AAAATTTTAT TCATACATTC 
    AGATCTGAAG GAGAACTCTT TTGAACACAT GGGAATACAC TTGGGAGAGA 
    TTGGTATTGT TCTCTTTCCT TGGTTTCTGT GGTTAAGTTT ATTCCTAAGT 
    TGTGGCTATG CAGCTATAAC TATTTCAAGT CCTTTGACAT TGGGACAAAC 
    TCTGAGTTCC CCTGGTGGAT TTTATGAGTT AGGATTCTTC AGTCCTAACA 
    ACTCTCGGAA TCAGTATGTA GGGATCTGGT TCAAGAAAAT TACACCACGG 
    GTGGTTGTGT GGGTGGCTAA CAGAGAAAAG CCGATCACAA CCCCTGTGGC 
    AAATCTTACT ATCAGCAGAA ATGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3791224 [Map]; Strand: c
      • AT1G11280.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -412; Region: promoter
      • AT1G11280.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -348; Region: promoter
      • AT1G11280.3 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -348; Region: promoter
      • AT1G11280.4 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: -412; Region: promoter
    Flanking Genome Sequence: 13-5806-1 - 3-prime edge 
    CCAATTCCAC ATCAACACTT TTCAGCTCTC ATATGTNCTG GGAAAGAAAG 
    GAAAAACAGA GCTGCAAAAA TGAATAAATT TTTACTTGGA CGCTTGCAAA 
    CGAGACTTCG CTCACATATT GTAGCTCTCT ATTCGTAGTG ATCAGCTTAA 
    ACCTTGTTTA TGATACAGCA AATTGTAGCT CTCTACAAAG GCTTCTACTT 
    CAGACCAGGT CTTGTTATTC CTCAAATTAG TTTTCTCTCC CGGATATATA 
    ATGCTCATCA ATGTTTTCGG TGGAGGGTCA TGTCACCAGT AATCTCCGCA 
    CGAACAGGCA CCGTTTTTGA AATGGTGAAA CCGTTGCATG TCTCGTACTA 
    CAATTTCCCG TCCGGTCACA AGGGAAATGT ACTTTGTAGC ATTGTGACAG 
    TCAGCACAAA CCCGCAGGTT CTTTCTTACG TGAATAGTTG TACCTGCAGT 
    TGTATTCAGC AATCCAAAAG ATATAGCCAG CTTCTCACTG TGGGTACTCA 
    GCAGTTGCTC CTTAACATCA TTTTCCACAC CGAGGACTAA ATTCGTGTCA 
    GGAACATAAC CAGCTTCTTT GATGTGGCAT ATCAGCTTCT CAAGAAACGC 
    ATAAATCTTC TTGGAATCGG GATGGGCTGT GCTTCCAGAG AAGAAGCTAT 
    GCACCTCGTT CTTTATCTNC ACCATACTGC AGCCAGGGAG TT

AT1G11280.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119990 Blast hits to 118206 proteins in 4416 species: Archae - 104; Bacteria - 13409; Metazoa - 44077; Fungi - 9917; Plants - 34701; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11280.2

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61480.1); Has 119975 Blast hits to 118187 proteins in 4400 species: Archae - 104; Bacteria - 13364; Metazoa - 44144; Fungi - 9898; Plants - 34683; Viruses - 420; Other Eukaryotes - 17362 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11280.3

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 119306 Blast hits to 117553 proteins in 4294 species: Archae - 104; Bacteria - 13114; Metazoa - 43962; Fungi - 9889; Plants - 34469; Viruses - 418; Other Eukaryotes - 17350 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11280.4

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 29 (TAIR:AT1G61380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR