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13-5812-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30082082 [Map]; Strand: c
      • AT1G79970.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G79970.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-5812-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAA 
    ACAATACGAG TCTTGTACGT ATTCTCTCTT TGCTTCCTAA AAATCAATCA 
    ATCAATCAAT CACAGAGTAC GCACCACCAG CCAAATTATA AGTGAGAGAG 
    AAGATAACGA CGACAAGAAG AAGAAGGAGA AGCTCCAAAA TTGTTCATTT 
    GCATTTCTCC AACTTGTAAA ATCGAGCACC TGCATTTGGG GGCTTTCCTC 
    TTATCTGGAA ACAAAGAGAG CCGCCACTGA TGGTAAATTT GCTTTTCATC 
    CTTAACCTCT CTACTTCTTC TTCTTCTTCT TCTTCTTCTT CTTCTTCTAC 
    TACCACTACT TTTTGAGATT CTATCTATCT ATAGTCATCC ATTTTGACTA 
    GGAGACTTTA TATTATTTTC TTCATTNGAA AGATTCTCTA TACATAGATA 
    GTCATCGATT GTGTTTCTGG GTGTGGCTGC AATATCTGTA GTTTTGATTT 
    GAAACTTGCC TGAATCAAAT CCNACCATGA ATTACCNN

AT1G79970.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79970.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR