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Mutant Lines
13-5911-1

13-5911-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 280566 [Map]; Strand: c
- AT4G00680.1 - [+] show detail - actin depolymerizing factor 8
  Distance: 0; Region: intron1 (CDS)
- AT4G00690.1 - [+] show detail - UB-like protease 1B
  Distance: -747; Region: promoter

AGATTAGAGT TCGATTCTCC AAAGAAAATA TGGTAAGTTC CTACATTTAA 
TCTTCTGATG TAGATGATGA TGATGCATTG ATTCTGTTTA TGTTCTGATT 
GTCAACATGT GAAATTTATA TGTGGATGGT GTGGTTGAAT ATATATGGTT 
TTGTGTTATT TGGTTTGGAA GTGTAACACA TGAATAGGTT TCATGTATAT 
ATTGACTTCA TTAAGAATGA TGTTGTGGAC ATATGGTTTA TATGCTATGA 
TCCTAAATCA CAATCTAAGT TTTATGGTAA CTGGTTAGGA AGATGTATAG 
AATGGAAAAA GCT

3 prime edge [+] show sequence

Chromosome: 4; Position: 280639 [Map]; Strand: c
- AT4G00680.1 - [+] show detail - actin depolymerizing factor 8
  Distance: 0; Region: exon1 (5UTR)
- AT4G00690.1 - [+] show detail - UB-like protease 1B
  Distance: -674; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTGTGTTTGA TGATTGGGAA AAATGAAGAG GATAGGGAAG AGTGAGGAGG 
ATTGGGGGGG TTTATGAGGT TGAGGAAAAA CACAAAAGTT GGGTAATATT 
CTTTTGGTCT TTAGGCTGAT CACGTCTTGA AGTAGATGAC TTTGATGCTA 
TCACGTCGTG CCCATTTTTT TCAAACCTAT ATATAGTTTT AATCCTTGAT 
AATACATATA AATCTATATT TATTTGTGTT TGTTGCATAT GAGCTCAACT 
TTGGTCGGGA GATCATTGGA CCGTTGAAGT TTTCATGATG AACATGTTAT 
ATATATTTTT TTCTCTTCTA TATACTTTGA CTTTAGCCTC TATGCTAAAT 
ATTGTTTTAT GCGGCCCAAA CGACCATTGA ACCCATAATT GGGCCTTGTT 
CACTTCTGGC CCAATGGCCT TTTTCTCTCT TTTCCTTCAC TACTATTCTT 
CTTCTTCTTC GTTCTTCTAC ACACGAGCGC GCCTCTTCTT CTTCCTTAAA 
CACACATCTC TCTACACTTC ATTTTCTCAC CTTTCTCTTC TGATTTCACT 
TGTACACGAT TAANCAAAGA TTCAATTTCC AACATTGACG TTTCTCTCGA 
GTGGGTGAAG TANAAAAAAA GTTATGTTTA AACCCTAAAA TATTTTTTTC 
CTGAAAAGTC NATCTCTAAT GGCTCTNGT

AT4G00680.1

Model type: Protein coding
Short Description: actin depolymerizing factor 8
Computational Description: actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00690.1

Model type: Protein coding
Short Description: UB-like protease 1B
Computational Description: UB-like protease 1B (ULP1B); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1373 Blast hits to 1372 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 603; Fungi - 267; Plants - 349; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink).
Link: InterPro Scan - TAIR