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13-5914-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4777602 [Map]; Strand: w
      • AT5G14780.1 - [+] show detail - formate dehydrogenase
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-5914-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTTC AGTGTAATGG GAAGACGCAC TTTTTGATGA 
    TTTTTCAGAG TTTTAGGTAG TTCTTACATG CGTCGGATCT TTTCTTGTTC 
    TTATATATGT ATTCATGTTT CTTTGAATCG GGTATATGTT AAAATTTAAA 
    TAGCTTTTTG AACTTGCTTA TGAAACAGGC ATCTTCTGGT GATAGCAAAA 
    AGATTGTAGG AGTTTTCTAC AAGGCCAACG AATACGCTAC CAAGAACCCT 
    AACTTCCTTG GCTGCGTCGA GAATGCCTTA GGAATCCGTG ACTGGCTTGA 
    ATCCCAAGGA CATCAGTACA TCGTCACTGA TGACAAGGAA GGCCCTGATT 
    GCGGTAAGTA TTTTCCAATC TAACAAGTAC TTGAAGAGAT TCAAAATCTT 
    TAATTCTGTT TTTCTATAGC ACAAACTATA AATATGAATG CAAGCCTCCT 
    TTTGATTCAA CTCTTATTTA TTAATGGCAG AACTTGAGAA ACATATCCCG 
    GATCTTCACG TCCTAATCTC CACTCCCTTC CACCCGGCGT ATGTAACTGC 
    TGAAAGAATC AAGAAAGCCA AAAACTTGAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4777576 [Map]; Strand: w
      • AT5G14780.1 - [+] show detail - formate dehydrogenase
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-5914-1 - 3-prime edge 
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATACAGT 
    AAGACACTAA TCTGTTCTGT TTTGAAACTA TATACAACGC CCAAACGTTT 
    ACAGGCCCGT TTAGAAGCCC ATATCAAACA TCGTGCCGTT TAGTTATTAC 
    AAAAAGAGAC ACCATGTAGT AGTTGGGTTC CATAATGGAA ACTTTAGCTG 
    GCCTAATCAG AAACGACAGT TGTGCTTTCC TAATTTTAGT CACACGTTTC 
    AGTCATGCAC AGTCAGTCTG ATCATATCAC AACAAAATCA AAATAGGTTC 
    TACAAAACCA AAATTTGCAT ATCCTCAAAA TCATAAGGCC AAAGATCCAA 
    AAACATCTAT CCCACACACA ATCGAAAACG TTACCAACCG CAAACAGTAA 
    AATCAAGCGA AATCACCACA CAAAACTCTG AGAAACTATA AATATCACCA 
    ACTTAGAACC TTAATCGTGA AAAAGGAGAG AGATCGAAAG AATTATTACA 
    TTAAACTGAC GTCGAGCGAA GTAACCCGAA GAAGAAGAGG AAGAACAGGC 
    CCTGATCGTT GCCTTAGCGG CTTGTCTCAT CGCCATGGTT GAGAAGAGAT 
    AAATATCAAT TTGGTTACTC TTTGGTCGAT TTTTGTTTTG TGTGAAATCA 
    GTAATTGGAG ATGAGAGGAT TTATATAGGA CGAAATGTTC ACGCACCTGC 
    ACCAAATCAT CCTTTTCTTC GN

AT5G14780.1

Model type
Protein coding
Short Description
formate dehydrogenase
Curator Summary
Encodes a NAD-dependent formate dehydrogenase.
Computational Description
formate dehydrogenase (FDH); FUNCTIONS IN: NAD or NADH binding, binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: response to cadmium ion, response to wounding; LOCATED IN: thylakoid, mitochondrion, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT1G17745.1); Has 28984 Blast hits to 28977 proteins in 2707 species: Archae - 468; Bacteria - 17844; Metazoa - 730; Fungi - 1196; Plants - 566; Viruses - 5; Other Eukaryotes - 8175 (source: NCBI BLink).
Link
InterPro Scan - TAIR