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13-5924-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14973698 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 13-5924-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAA ATATATATTA TATATTTGGA TACTTTTATC 
    TTCCCTGGCT TGGTATTATC ATTTGATTTC TATCGATTTG TGTGGATCAG 
    GTTGGTTTGC GTATTGAGCA TCCTCAGGAG CTAATTAACA GTATACAGGT 
    TTGTTCGATT ACCNNANNNN NCNAGTCGAN CACTCTNGCA C

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14973675 [Map]; Strand: c
      • AT4G30720.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 13-5924-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTATATAA 
    GTTAAATATA TTATATATTG ATTCAAAATG GATATTTTAT AAAACAACAC 
    ACTCAAGAAA TATGTACAAG GAACTTACAG CAAAATCTTT TGGAATCAAT 
    TCGACATTAC GAGAATGAAG CATCTCATAT GTGTCACGTG CTTGAATGAC 
    CAACTGCAAG AACAACTGCA TCAACCTTTA AATTCTGGGA GGTAGTCTGC 
    AATTGGTTTG TTGAATCCGA AACCCTGACT CCAACAACAC GAGAATCCTC 
    TACCAGAAGA TCATCTACCC GAGTTCCAAA CTTGATAGTC ACCTAATTAA 
    GTATATGGAA ATGGAATCAA AGAGAATGCT CAGAGGAGAA GAAAAAAAAA 
    AAAAANCCTT TAAAANNTNT NNAAAAANCT TAAANAATTN TTTTTTTNAA 
    AANTNNCCCC CCCCTTTNAA AAAAANNNNN GAAANTNCNG GGNNNGGGNA 
    NCNCCNTTTT TNNNCCCAAA ANNNGGNTTC CCGNGNNNNA NTTTTTTTNG 
    GGGNCCCCNA ANGNAANCNN CNTTTTTAAN NCCNNNNAAA AANTNANCCN 
    GGGGGCNNAA TTTTTNNTTT TNNNCCCNAA NANNNANGGN CTNAANTNAA 
    ANTTTGGGNG GNNNAAAANA NNAACCCCNN AAANGGGGGN CCCTTTTTTT 
    NNTTTTTNNN NAAAAANNTT NCNNNCCGGG GCNGNAANCN CCGGGNCCNN 
    NNNAN

AT4G30720.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Curator Summary
Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink).
Link
InterPro Scan - TAIR