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13-5943-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2923632 [Map]; Strand: c
      • AT3G09520.1 - [+] show detail - exocyst subunit exo70 family protein H4
        Distance: -111; Region: promoter
    Flanking Genome Sequence: 13-5943-1 - 3-prime edge 
    AAGTTAACGA CGTCGCTCTA ACGCTGTGTA GTAGTCTTAT AAATACCCCT 
    TCAACGACTA AATCTTCTCC CCTCATAAAC TCTCTCACAA CTTGCATTAT 
    CGTTTCAAAA TTTTCTCTCA ACGACGAAAA ACTGAGTCCT CTAGAAATTT 
    CCACNGACGA CTTGATGATG ACGAGAAAAG CAATGATAAA CATTTGTTGC 
    GTGGCCACAA CGCCGTCCAA GTATCCACCT CCTCCTCCTC TTACGTTAAC 
    CCCTCGCCAG AGTTTGGAAT CGGCGGCTAT CTATGGAGTC ATTGAATCCG 
    CGGCGGATAT AATCGAGAGA TGGAACACTG AGACCAACAC TTTCGCTAAA 
    GTTACTTGTA TGTTCTACGA GAACAAACCT GAAGCCATGA TGTTCATCGA 
    ACGTGTGAAG GATCTTCAGA AGACGATGGA CGTACTCGTG AGTGAGGATC

AT3G09520.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H4
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR